Phalacrocorax carbo (great cormorant): 104040088
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Entry
104040088 CDS
T08596
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00514
Other types of O-glycan biosynthesis
pcao04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
104040088 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104040088 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pcao01003
]
104040088 (RFNG)
Enzymes [BR:
pcao01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
104040088 (RFNG)
Glycosyltransferases [BR:
pcao01003
]
Glycan extension
O-Glycan
104040088 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
104040088
NCBI-ProteinID:
XP_009498918
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
GGSGRESLELKDIFIAVKTTRKYHKSRLDLLLQTWISQARGQTFIFTDWEDRELRLKAGD
HMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNPRTLLRLLSAFSHSQ
DVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGFCISRGLALKMSPWASLGNFIS
TAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLQGESVLQQVTLSYGDPENK
HNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gggggctcgggcagggaaagcctggagctgaaggacatcttcatcgcggtgaagaccacg
aggaagtaccacaagagccggctggacttgctcctccaaacctggatctcccaggcgaga
ggacagaccttcatattcacagactgggaggatcgggagctacgcctgaaagcaggggat
catatgatcaacaccaactgttctgctgtccatacccggcaagctctctgctgcaagatg
tctgtggaatatgataaattcctggaatctgggcaaaaatggttttgccatgtggacgat
gacaactatgtgaaccctcggactctcttgcgtctcttatctgccttctcacacagccag
gatgtctatgtggggcgaccgagtctggaccatcccatcgaagcagctgaccatgtccaa
agtgatggatcaaagacaaccgtgaaattctggtttgccacaggtggagcaggattctgt
atcagcagaggtcttgccctcaagatgagtccctgggccagcctaggcaatttcatcagt
accgcagaaagagtgcgtcttcccgacgactgcactattggctacatcattgaagggctg
ctggaggtaaagctgctgcacagcccgttgttccattcccatctggaaaatctgcagaga
ctacaaggcgagtctgtgctgcagcaggtaaccctaagttacggggaccctgagaacaaa
cacaatgttgtgagtgtgggaggagtatttggccttcagcaagatccaacccgatttaaa
tctgtccattgtctgctctatcctgacactatctggtgccccgctaagaagatgtcataa
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integrated database retrieval system
