Phalacrocorax carbo (great cormorant): 104044005 Help Entry 104044005         CDS       T08596                                  Symbol AFF4 Name (RefSeq) AF4/FMR2 family member 4   KO K15185   AF4/FMR2 family member 4 Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao03250   Viral life cycle - HIV-1 Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     104044005 (AFF4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pcao03021]     104044005 (AFF4) Transcription machinery [BR:pcao03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Super elongation complex (SEC)      104044005 (AFF4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AF-4 AFF4_CHD AF4_int Motif Other DBs NCBI-GeneID:  104044005 NCBI-ProteinID:  XP_009502050 LinkDB All DBs Position Unknown AA seq 1160 aa AA seqDB search MNREDRNVLRMKERERRNQEIQQGEEAFPPNSPLFAEPYKVTSKEDKLSSRIQSMLGNYD EMKDLIGDRSLQKLVGIPKPTVPSTPDEKSNQSFFGDQRHNASSHQSSKWTPVGPAPSTS SQSQKRSSGLQSGHSSQRGSGNNTSSSGQRHDRDSYSSSSSRKKSQHGSEHSKPRSSSPG KPSAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPSFSSGQHSNQSFPPS LMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQTHSSSVNELKPSSKAHLTKLKIP SQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSSFGTGE QKRYNPSSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTVPRSTPXSNSEPSQHNSEG ADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLNK VNSHKVSPASSVDSNIPSSQGYKKEGRDQGTGSGYTDQSGSKDSISSTPGRDSKPTQKGS ESSRGRQKSPAQSDSSTQRRTVGKKQPKKAEKTSVEEPRGGLKIESETPVDMATNIPSNR HKAATKGSRKPNIKKEPKSSPRPTTEKKKYKASSKSAQKSREFIETDTSSSDSDENESLP PSSQTPKYSESNRTPVKSSMEEDDSFFRQRIFSPMEEKELLSPLSDPDERYPLIVKIDLS LLSRIPGKPYKDADAPKVEKKNVPEKHARESQKQPSDKSSTKGKRKHKQNEDENRASESK KTKLEEKAPSGHKTSSSRESSKPSAVKEKDLLPSPAAPVLQKDSKQEHGSRKRTVSQSSS LKSSSNLSKDGSSGSKSSSSSKQKKTEGKGSSSAKETKEKILNNSSNCPPASAQSTESSK SRRAKLVFDDRTYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKNA QESKSPFPMYSETVELIKYTMKLKNYLAPDATAADKRLAVLCLRCQSLLYLRLFKLKKES ALKYSKTLTEHLKNSYNNSQAPSPGIGSKPVGMPSPVSPKLSPGNSGNYSSGAANPSGSG SSVTIPQRIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNSSI MTDLVRYTRQGLHWLRLDAK NT seq 3483 nt NT seq  +upstreamnt  +downstreamnt atgaaccgtgaagaccggaatgtgctgcgtatgaaagaaagggaaaggcgaaatcaagaa attcaacagggtgaagaagcctttccacctaactctcctctctttgctgaaccatacaaa gttaccagcaaagaagacaaattgtctagtcgtattcagagcatgcttggtaattatgat gaaatgaaggatcttataggagacagatcgctacaaaagcttgttggaattcccaaacca actgtaccatcaacaccagatgaaaaatcaaaccaaagtttctttggtgatcagagacat aatgctagctcacaccagagcagcaaatggactcctgtaggaccagcacccagcacttcc tcgcaatctcagaaacggtcctcgggtttacagagcggacacagtagtcagcgtggcagt ggcaataacactagcagcagtggccagaggcacgaccgcgactcgtacagtagcagcagc agccgcaaaaaaagccagcatgggtctgaacactccaaaccccgttcttccagccctgga aaaccatctgctgtttcttcgttgagctccagccattcgagatctcatggaaatgatcac cacagcaaagaacatcaacgttcaaaatctccccgggatcctgatgccaactgggactct ccctcccgtgtaccctcattttcaagtggacaacactctaatcagtctttcccaccctca ctaatgtccaagtccagttcaatgttacagaaacccactgcgtatgtaaggccaatggat gggcaggaatccatggaaccaaagttatcctccgaacactacagtagtcagacccacagc agcagcgtgaacgagctgaagcctagcagcaaagcacatctaaccaagctgaaaatacct tcacaaccgctagatgcatcagcatctggtgatgtgagctgtgtggacgaaattctaaaa gagatgacccattcttggcctcctccactgacggctattcatacgccgtgcaaaactgaa ccgtcaaagtttccttttccaacaaaggagtctcaacagtccagttttggcactggagaa cagaaacgatataatccttcatcaaaaacatccaatggtcatcaatccaaatctatgttg aaagatgacttaaaacttagcagtagtgaagacagcgatggagagcaggactgcgataag acagtgccaaggagcacacctgncagtaattctgagccttcgcagcataacagtgaagga gcagataattcaagggatgactcgagcagccacagcggatctgagagcagttcagggtct gactctgaaagtgaaagcagttccagtgatagtgaagctaacgaaccatcacagagtgca tcccccgagccagagccaccaccaacaaacaagtggcaactggataactggttgaacaaa gttaattcacataaagtgtcaccagcttcttctgtggacagcaatatcccatcctcccaa ggctacaaaaaagagggacgggatcaggggacggggagcgggtacaccgatcaaagcgga tccaaggattcaatttcttctacaccggggcgagattccaaacccacccaaaagggctcg gagagcagtcgcggcaggcagaagtcacctgcccagagcgacagctcaacacagaggagg actgtaggtaaaaagcagcccaagaaggcagaaaagacatctgtcgaggagcctagagga ggtcttaaaatagaaagtgaaaccccagtagacatggcaacaaatataccttcaaacagg cataaggcagccacaaaaggctcgaggaaacccaatataaagaaagagcccaaatcttcc cctcggcctaccacagagaaaaagaaatacaaggcttcaagcaaatctgcccagaaatcc agggaattcatagaaacagatacctcatcctctgattcagatgaaaatgagagcctgcct ccttcatcacaaacacccaaatactctgagagcaataggactcctgttaaatcttccatg gaggaggatgacagcttttttcggcaaagaatattctctcctatggaagagaaagagctt ctttcaccactcagtgatcctgatgaaaggtacccacttattgtgaagattgacctgagc ctcttatcaagaataccagggaagccttacaaggatgctgacgcacccaaagtggaaaag aaaaacgtgccggagaagcacgcgagagaatcccagaagcagccatctgacaaaagttct acaaaaggcaaaaggaaacataagcagaatgaggatgaaaacagagccagtgaaagcaag aaaacgaaactggaagaaaaagctccatcaggacacaagacttctagcagcagggagtcc tcaaagccaagtgctgttaaagagaaggatttactgccgtctcctgctgccccagtcctg cagaaagattccaagcaagaacatgggtcccggaagaggacagtcagtcagtcgtcatcc ttaaagtccagcagcaaccttagcaaggacggtagcagcggcagtaaaagcagctcatct tccaaacaaaagaagacggaggggaagggttctagcagtgctaaggaaaccaaggaaaag attctgaacaattcctcaaactgccctcctgcatctgcacagtccacggaaagttcaaag tcaagaagagcaaaacttgtttttgatgataggacttactcagctgatcattatttacag gaagcaaagaagttaaaacataatgcagatgcattgtctgacaggtttgagaaggctgtg tactacctagatgctgtagtgtcattcattgagtgtgggaatgcattggagaaaaatgct caggaatccaagtccccgttccctatgtattcagaaactgtggaattaatcaaatacact atgaagctgaagaattacttggcgccggatgctacagctgcagataaaaggctagcagtg ctttgtcttcggtgtcaatctctactatacctaaggcttttcaaactgaaaaaggaaagt gcattgaaatattctaagactctgactgaacatctgaagaattcctataataattctcaa gcaccgtcacctggtataggaagcaagcctgttggaatgccgtctccagtctctccaaag ctgtctccagggaattcaggaaattactcttccggggcagccaacccttcagggagcggg tcttcggtgacgatcccccaaaggatccatcagatggcagccagctacgtccaagttacg tccaacttcctctatgccactgaaatttgggaccaagccgaacagctgtctaaagaacag aaagagttctttgctgaactggataaagttatgggccctctgatttttaattcgagcatc atgacagacctagtgcgttacacccgtcagggattgcattggttgcgcctggatgccaag tga

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