Phalacrocorax carbo (great cormorant): 104044139
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Entry
104044139 CDS
T08596
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104044139 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcao03400
]
104044139 (TDG)
Enzymes [BR:
pcao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
104044139 (TDG)
DNA repair and recombination proteins [BR:
pcao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
104044139 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
104044139
NCBI-ProteinID:
XP_009502204
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
YYAYLQQAQAFYTFPFHQMMTAAPNMEIMTEQLTLEGIPEPNIAQEPPKEVKKGGRKRKA
KATEPKQPKKPAAKKEKSAKSKGKQEKITDTFKVKRKVDRFNGVPEAELLTKTLPDILTF
DLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSNEQLNHMDDHTLPHKYGIGFT
NMVERTTPGSKDLSSKEFREGGRILMQKLQKYKPRIAAFNGKCIYEIFSKEVFGIKVKNL
EFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIAPNTDVQE
VQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYCDRALYGNDECNFSSNGTGSNPQY
CEGSSFGEVPNGQWMTQSFADQIPEFGAGMTREEEGSSA
NT seq
1201 nt
NT seq
+upstream
nt +downstream
nt
atactacgcgtatcttcagcaagctcaagctttttacacatttccgttccatcaaatgat
gactgcagcgcctaacatggaaatcatgactgagcagctgactctagagggcattccaga
gccaaacattgctcaggagcctccaaaagaagttaaaaaagggggaaggaaaagaaaagc
caaagcaactgagccaaagcaacccaaaaagcctgctgctaaaaaagaaaaatcagccaa
gtcaaaaggcaaacaagaaaagatcacagatacttttaaagtcaaaagaaaagtggaccg
ttttaatggtgtgcctgaagccgaacttctgaccaagactttacctgatattttgacctt
tgatctggacattgtaataattggcataaaccctggcttgatggcagcttacaaaggaca
tcattaccctggacctggaaaccatttctggaagtgtcttttcatgtctggtctgagtaa
tgaacagctgaaccatatggatgaccacaccttgccccataaatacgggattggatttac
aaacatggttgaaaggacgacacctggaagcaaagacctctccagcaaagagtttcggga
aggagggcgaattctgatgcagaagttacaaaagtataaacctcgtatagcagctttcaa
tggaaaatgtatttatgagatttttagtaaggaagtttttggaataaaagttaagaactt
ggaatttgggctgcagccacacaaggtgccagatacagaaactctctgctacgttatgcc
atcatccagcgcgagatgtgctcagtttcctcgtgcgcaagataaagttcattattacat
aaagctgaaagacttaagggatcaactgaaaggcatcgcgccaaacacagacgtgcagga
ggtgcagtacacgtttgacttgcagcttgcacaagaggacgctaaaaagatggctgtcaa
agaagaaaaatacgatccaggttatgaagcagcatatggaggagcttactgtgatcgtgc
actatatggaaatgatgagtgcaatttctcttcaaatggaaccgggagcaatccacagta
ctgcgaggggtcgtccttcggggaagttcctaatggacaatggatgacacagtcctttgc
agaccagattccggagtttggtgctggcatgacacgggaggaagagggaagcagtgcgta
a
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