Phalacrocorax carbo (great cormorant): 104044683
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Entry
104044683 CDS
T08596
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04620
Toll-like receptor signaling pathway
pcao04621
NOD-like receptor signaling pathway
pcao04622
RIG-I-like receptor signaling pathway
pcao05164
Influenza A
pcao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104044683 (TRAF3)
04621 NOD-like receptor signaling pathway
104044683 (TRAF3)
04622 RIG-I-like receptor signaling pathway
104044683 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104044683 (TRAF3)
05168 Herpes simplex virus 1 infection
104044683 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
Sina_ZnF
MPS2
ATG16
zf-C3HC4_2
FliJ
Spc29
Tropomyosin
KxDL
zf-RING_6
DUF1664
Crescentin
SPATA24
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
104044683
NCBI-ProteinID:
XP_009502842
LinkDB
All DBs
Position
Unknown
AA seq
567 aa
AA seq
DB search
MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPHADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtacaacaaagggcc
aatcccgatcgcagtccttcagcatccatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgcagtggaagacaagtataaatgtgaaaaatgtcatctcatcttatgc
aatcctaaacagactgaatgtggacatagattctgtgagacctgcatgaatgccttgcta
agttcttccagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtgttt
aaagataattgttgcaggagagaactacttgcccttcaaatatactgtagaaatgaaaac
aagggctgtaaagaacaactatctttgggtcagttactgatgcatttgaaaactgattgt
cagtttgaagaactctcatgtcctcatgctgattgcaaagaaaaaatactgagaaaggat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agtcaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcgtgtcctcataaatgtagtgttaaaacgctcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagtgtagagtccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacgcagctgagcagacatgatcagatgctgagtgttcatgatattcggctggctgac
atggacctccgattccaagttttagaaactgccagttacaatggagtattaatttggaaa
atccgtgattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtttaccttaat
ggagatggcatgggaaaggggacgcacttgtcgctgttttttgtcataatgcgcggagag
tacgatgcgttgcttccttggccatttaaacagaaagtgacactcatgctaatggatcag
ggaccgtctcgacgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcagatctaccagacccctga
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