Phalacrocorax carbo (great cormorant): 104045276
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Entry
104045276 CDS
T08596
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104045276
Cell adhesion molecules [BR:
pcao04515
]
Cadherins
Protocadherins
104045276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
104045276
NCBI-ProteinID:
XP_009503520
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
QVNLASGVLLLDSRLDREALCRQSPTCSLHLQLVMENPLQLHRIEVDILDVNDNAPQFPK
LEVVLEITEVANPGTRLPLEVAEDPDMGSNSISTYELSPSEHFALSINVRGDGVKMPEIV
LEKALDREKVAVHHLTLTALDGGNPVKSGTAKVTIHVLDANDNPPVCDPPVSTVHLEENM
PVGTLVTKLNVTDLDEGPNGIVEYSFKTSNNAPSKFTNLFSLDTRTGEIRTKGPLDYEES
SAYEIAVRARDKGSPAMEGHCHLRVELIDVNDNSPEIVLTSLSSPVQEDAIPGTVIALIG
VKDSDSDDNGQVHLQIAKELPFKLVSSFKEHFSLVTNGPLDREKDIGYNITVRAVDSGSP
QRATQKTFYLQIADVNDNAPNFSRPFDIAHIQENSLPGTSVFQVSASDPDEGSNAELSYS
ILHNGMQDIPISTYFRIDQDNGTIYTVRALDYEQDKVFQVPVEVKDAGSPALSSTAVVHV
FVLDENDNAPTIVYPSVPKGSAFHQTIPALAEPGYLVTKIVAVDADSGHNAWLSYQLQET
AETLPFQVERRSGELRVAQAIRESEGPHRLVVEVRDNGTPSLSASVVIVISLEENSVQDF
AKSLDLPESYPKDTNLTLYLIISLVSISLVSCVMFAVVAVRCLKAGTASWTFTCCCRGTG
RKPTSHFRGQMKPDGFIKYLDVGGVGLTSQAQNYTSCFSPMSDQSDFLFVKPFSHSSTAE
TVAAYEQVTSTLASPCDG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
caggtgaacctggcatcgggtgtgctgctcctcgacagcaggctggacagggaggcgctg
tgcaggcagagccccacgtgctccctgcacctccaactcgtcatggagaatcccctccag
ctccaccgcattgaggtggacatcctcgacgtgaatgacaacgcaccccagttccccaag
ctggaggtggtcttggagatcaccgaggtagccaaccctgggactcggctacccttggag
gtagcagaagacccggatatgggctccaactccatctccacatatgagctcagccccagt
gagcatttcgccctgagtatcaatgtgagaggagatggtgttaaaatgcctgagattgta
cttgaaaaagcactggatagagagaaagtggctgttcatcacttaacattgacagccctg
gatggggggaatccggtgaaatctggcactgccaaggttactatccatgtgctggatgca
aatgacaaccctcctgtctgtgacccacccgtatccacggtacatctggaggagaacatg
ccagtgggcactctggtcaccaagttgaatgtcactgacctggatgaaggtcctaatggg
atcgtggaatattctttcaaaactagcaataatgcacccagtaaattcaccaacctgttc
tccttagacacccggacaggggagatcagaaccaaaggcccactggattatgaggaatcc
agtgcttatgagattgcagttcgagccagggacaagggatctccagccatggaaggacac
tgtcacctgcgagtggaactaatcgatgtcaatgataacagcccagagattgtgctgaca
tctctctccagcccagtgcaggaggacgcaatcccgggcactgtgattgccctcattggt
gtgaaggacagcgattctgatgacaatgggcaggtccatttgcagatagcgaaagaactc
ccatttaaactggtgtcatcttttaaagaacatttctcgctggtcacaaatggtcccctt
gatcgggagaaggacattggatacaacatcacggtgagagctgtggattcagggtcccca
cagagggccacgcaaaaaaccttttacctccaaattgctgatgtgaatgataatgcacca
aatttctccagaccttttgatatagcgcacattcaggaaaactcccttcctggaacttct
gtttttcaagtgtcagcatctgatcctgatgagggtagcaatgccgagctgtcttactcc
atcctacacaatgggatgcaggatatacccatctcaacctactttcgaatagaccaggac
aatggcactatctacactgtgagagctctggactatgagcaggataaggtgttccaggtg
cctgtggaggtgaaggatgctgggtctcctgcgctgagtagtactgctgtggtccatgtg
ttcgtcctcgatgagaatgacaatgccccaaccattgtctatccgtctgtccccaagggc
tccgccttccaccaaaccatcccggccttggcagaacctggctatctggtcaccaaaatt
gtagctgttgatgctgatagtggccataatgcctggctgtcctaccagctgcaggagact
gcagaaactttgcctttccaagtggaacgccgctctggagagctaagggttgcacaggct
atcagggagtcagaaggtccccacaggctggtggttgaagtgagggacaatgggacaccg
tccctttcagcctctgtggtaatagtcatttctctggaggaaaacagtgtgcaggacttt
gccaaatccttggacctccccgaatcttatcccaaggataccaacctaaccctttacctc
atcatctccttggtgtccatttcccttgtctcctgtgtgatgtttgctgtggtggctgtc
cggtgtctcaaagctggcactgctagctggaccttcacatgttgctgccgagggactggc
cgcaagcccacctcacatttccgtgggcaaatgaagccagatggcttcatcaagtacctg
gatgtgggaggagtgggcttgacctcccaggcacagaattacacctcttgtttctcaccc
atgtctgatcagagcgatttcctctttgtaaaacctttcagtcattctagcactgcggag
actgtggctgcctacgagcaggtgacaagcaccttagcgagtccctgcgatggg
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