Phalacrocorax carbo (great cormorant): 104046379
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Entry
104046379 CDS
T08596
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04514
Cell adhesion molecules
pcao04520
Adherens junction
pcao04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104046379 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104046379 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
104046379 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcao01009
]
104046379 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcao04515
]
104046379 (PTPRF)
Enzymes [BR:
pcao01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
104046379 (PTPRF)
Protein phosphatases and associated proteins [BR:
pcao01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
104046379 (PTPRF)
Cell adhesion molecules [BR:
pcao04515
]
Immunoglobulin superfamily
Type II RPTP family
104046379 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
I-set
Ig_3
Ig_2
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
ig
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
V-set
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
104046379
NCBI-ProteinID:
XP_009504803
LinkDB
All DBs
Position
Unknown
AA seq
1785 aa
AA seq
DB search
DHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNGRIKQL
RSGGTPIRGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSIP
PSNHEVMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSANYT
CVAISSLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPK
SLEGQFQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPP
LKVQARMLSASTMLVQWENGQIRGYRVYYTTDSHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTIEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFRLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQD
LVNITKDTSITLMNLKPDTTYDIKVRARTNKGVGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTSVPVRWYYIVVVPADQST
SSLAARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKSKQERKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQ
TPGKEQHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYA
NVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQR
TATIVMMTRLEEKSRVKCDQYWPSRGTETYGMIQVTLLDTVELATYTVRTFALYKNGSSE
KRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVID
AMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFA
HIQKLTQVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVC
LQPIRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLR
EMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTD
WPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYE
GVVDMFQTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5360 nt
NT seq
+upstream
nt +downstream
nt
aagaccacctcccagctggcttcccgaccattgacatgggcccgcagctgaaggtggtgg
aaaaggcccgcacagccacaatgctctgtgctgccagcggtaaccctgatcctgaaatct
cctggttcaaggacttcctgcctgtcgacactgcaactagcaatgggcgaatcaagcagc
tccgctcgggtggtacaccgatcagaggagctctgcaaatagagaacagcgaggagtcgg
accaaggcaaatacgaatgtgttgcaaccaacagcgcaggaacccgctactctgccccag
ctaacctttacgttagagatcagcgagaagtgcggcgtgttgctcctcgattctctatcc
ctccgagcaaccacgaggtgatgcctggggggagcgtgaacctcacgtgtgtggcagtag
gtgctccgatgccctacgtgaagtggatggctggtgtggaggaactgaccaaagaggatg
agatgcccgtcggtaggaacgtcctggagttgaataacatcgtgcagtctgccaactaca
cctgcgtggccatctcctccctcgggatgatcgaagccacagcccagatcactgtcaaag
cactgccaaaacccccaacagagccattagtgactgaaacgacagctaccagcgtgaccc
tcacctgggattcgggcaactctgaccccatttcatattatgtcatccagtacaagccca
aatccttggagggtcagttccaggaggtggatggtgtggcaacaacccgctatagcatag
gtgggctcagccccttctcggagtatgagttccgggtcatcgcagtcaataacattggca
ggggtccccccagtgagctggttgaggcccggacaggagagcaagctccttcaagtccac
ccctcaaagtccaggcacggatgctgagcgcgagcaccatgctggtccagtgggaaaacg
gacagatccgcgggtaccgcgtttactataccaccgactcgcatctgcctttaagcatgt
ggcaaaaacacaacactgacgacagccacctcaccaccgtggggagcctcatcactggga
ccacgtacagcatccgcgtcctggcctttacgtcggtgggcgacgggcccccctcggaca
tcatccaggtcaaaacacagcaaggagttcccgcccagccagctgacttccaggcagaag
cagagtctgatacccgcatcttgttgacgtggctgcccgcctctcaggaacgcattacca
aatacgagctgctctactgggaaggggaggatggcactcagcaaaaggtggagtttgacc
caacctcctcgtatgccgtggaaggtctcaaaccagacacgctgtataagttccgtctgg
gtgcccgctcagagctgggggtaggagtctacacccccacgatcgaagccagaactgccc
aatccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccactacca
tccgggtaagttgggtgccaccgcctgcccagagccgcaatggggtcatcacccagtact
ccattgcgtaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattg
gacgggaacactccagctgggagatcaaggacctggagaaatggaccgagtacaaggtgt
gggtaagggctcacaccgatgtggggccaggaccggagagcatccccgtgcacgtgcgca
ctgatgaggatgtgcccagtgccccaccacgaaaggtggaggtggagtctgtgaattcaa
cggccatccgggtgagctggaagctgcccatctccaacaagcagcacgggcagatccgtg
ggtaccaggttacgtacgtgaagttggaaaacaatgagccccgagggcagccagtgatca
aggacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacgg
tcattggaggcctgctgccggaaaccacctactccgtcacagtcgctgcctacaccacta
agggagatggtgcccgcagcaagccaaaagtcatcaccaccacaggggcagtcccgggga
agcccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccac
ccaaggagatggtaggggagctgctgggttaccggctgcagtacagacgtcttgatgagg
aaaagatgaacacgatagacttcgggaagagagaccatcactacactgtgaccaacctgc
acaagggggccacgtacctcttcagattgtctgccaagaacagagctggcccaggagagg
agtttgagaaggagatcactactgcagaagacgtgccaagtggctttccacagaacctgc
gtgtggtgggtctcaccacttccaccacagaagttgcatgggaccccccagtcttggcag
aaagaaacggcaagattgtcaactacacagtggtatacagggacataaatagccagcagg
acctggttaacatcaccaaggacacaagtatcactttgatgaatttgaagcctgatacca
cttacgacatcaaagtgagggcccgcaccaataagggggttgggccgctcagccccagca
tccagtcccggaccatgcctgttgagcaagtgtttgctaagaacttccgcgtcaacgccg
tcatgaaaacgtctgtgctgctgagctgggaagtgcctgactcctataaatctgcagtgc
cttttaagattctgtacaatagccagagtgtggaggtggacggccactcgatgaagaaac
tcataagtgacctccagccagacacggattattcttttgtgctaatgaaccgtgggagca
gtgctgggggactccagcacctcgtctcaatccgcaccgctcctgacgtcttgcaaagca
aacccatcgccacaaacaaatacatacaggaaggaaaattcacgctcacccttcccaaag
tccagaccagtgtgccagttaggtggtactacatcgtggttgtgccagcggatcagagca
ccagcagcctggctgctcggtggcggacacctgatgagatggagctcgaccagctgctgg
aggccataagccaagggagtcagagcaggcgccagcgacgccaagcagacagacttaagc
cctacattgctgctcaagtggatgtgctgcccgagaccttcaccttgggggatgagaaga
actacaaaggtttctacaacaagcccctatctcaagacctgagctatcgctgcttcgtgc
tggcctcactggaggatggagacacgaagagatatgcagccagcccctactcggatgaga
tcgtgatggaagtggcttcagcaaagcagcaggatgaaccagagatgctgtgggtgatgg
gacctgtcctggctgtgatattaatcatcatcattgtcattgctatactcctcttcaaaa
gtaagcaagaaagaaaaagggcacactccccttcttccaaggatgagcactccatcggcc
tgaaggactcgctcttggcccactcctctgatccagttgagatgaggcggctcaactacc
agactccaggtaaggagcagcacccccccatccctgtgacggacctcgctgacaacatcg
acaggctgaaagccaacgatgggctgaagttctcccaggagtacgagtccattgatccag
ggcagcagttcacctgggagaactccaacctggaagtgaataaaccgaaaaaccgctatg
caaacgtcatcgcctatgaccactcacgtgtcatcttgacctccattgatggggtcccag
gcagtgattacatcaatgccaattacattgatgggtatcggaagcagaacgcctacatcg
ccacgcagggacctctgccagaaaccctcagcgacttctggaggatggtgtgggaacaga
gaacagcaactatagtcatgatgaccaggctggaggagaagtccagggtaaagtgtgacc
agtattggccgagccggggtacggaaacctatgggatgatccaggtgaccctgctggaca
cagtcgagctggcaacctacaccgtccgcacctttgcactgtacaagaatggctccagtg
agaaacgagagctgcgacagttccagttcatggcttggcctgatcacggggtaccagaat
accccaccccaatcctggctttcctgcgacgggtcaaggcctgtaatccaccggatgctg
ggcccatggttgtccattgcagtgccggcgtgggccgaactggttgcttcatagtcatcg
atgccatgctggagcggatgaagcatgagaagaccgtggacatctatggccacgtgacgt
gcatgcgctctcagcgcaactacatggtgcagacagaggaccagtacatcttcatccacg
aggccttgctggaggcagccacgtgcggcaataccgaggtgcctgcacgcaacctctttg
ctcacatccagaagctgacccaggtgccaccaggcgaaagcgttactgcaatggagctgg
aattcaagctgctggccaactctaaagcacatacctcacgtttcatcagtgccaacctcc
cgtgcaacaaattcaagaaccgcctcgtgaacatcatgccatatgagctgacgagagtct
gtctgcagcccatccggggtgtcgagggctccgattacatcaacgccagcttcatagatg
ggtacaggcagcagaaggcctacatcgccacgcagggaccactggctgagactacagagg
atttctggcggatgctctgggagcacaactccaccatcgtggtgatgttgacaaagctgc
gcgagatgggccgggagaagtgccatcagtactggcccgctgagcgctctgcccggtacc
agtacttcgtggtggaccccatggcagagtacaacatgccacagtacatcctccgggagt
tcaaggtgacagatgccagggatggccagtcacggaccatccgccagttccagttcacag
actggcctgagcagggagtgccaaagacaggagagggcttcatcgacttcattgggcagg
tgcacaagaccaaggaacagtttgggcaggacgggcccatcacggtgcactgcagcgctg
gggttgggcgcacaggcgtgtttatcacactcagcattgtgctggagaggatgcgctacg
agggggtggtggacatgttccagacggtgaagaccttgcggacgcagcggccggccatgg
tgcagacagaggaccagtaccagctgtgctacagagcggcactggagtatctcggcagct
tcgaccactatgcaacgtaa
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integrated database retrieval system
