Phalacrocorax carbo (great cormorant): 104048946 Help Entry 104048946         CDS       T08596                                  Symbol TRAF2 Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism pcao  Phalacrocorax carbo (great cormorant) Pathway pcao04010   MAPK signaling pathway pcao04137   Mitophagy - animal pcao04141   Protein processing in endoplasmic reticulum pcao04210   Apoptosis pcao04217   Necroptosis pcao04621   NOD-like receptor signaling pathway pcao04622   RIG-I-like receptor signaling pathway pcao04920   Adipocytokine signaling pathway pcao05132   Salmonella infection pcao05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:pcao00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     104048946 (TRAF2)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     104048946 (TRAF2)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     104048946 (TRAF2)   09143 Cell growth and death    04210 Apoptosis     104048946 (TRAF2)    04217 Necroptosis     104048946 (TRAF2)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     104048946 (TRAF2)    04622 RIG-I-like receptor signaling pathway     104048946 (TRAF2)   09152 Endocrine system    04920 Adipocytokine signaling pathway     104048946 (TRAF2)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     104048946 (TRAF2)   09171 Infectious disease: bacterial    05132 Salmonella infection     104048946 (TRAF2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pcao03019]     104048946 (TRAF2)    04121 Ubiquitin system [BR:pcao04121]     104048946 (TRAF2) Enzymes [BR:pcao01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      104048946 (TRAF2) Messenger RNA biogenesis [BR:pcao03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      104048946 (TRAF2) Ubiquitin system [BR:pcao04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     104048946 (TRAF2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-RING_6 zf-C3HC4_4 Sina_ZnF zf_C2HC_14 zf-TRAF_2 zf-C3HC4_5 zf-RING_10 Thioredoxin_3 DUF4795 MATH zf-RING_UBOX Motif Other DBs NCBI-GeneID:  104048946 NCBI-ProteinID:  XP_009507824 LinkDB All DBs Position Unknown AA seq 472 aa AA seqDB search MAAANSTPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKK IISAGPQKCATCIQEGIYEEGISILEKSSAFPDNAARREVESLPAVCINSGCTWKGTIKE YEAHGEVCPEFPLTCEGCGKKIPREKFRDHVKTCGGSKVPCRFEVVGCAEVVENEKLPEH ESKCLAEHLYMLLSFVLSLKAGSGDLKPLPAISSSQNNSPQLAANSLGLESKLSKSLELL GRCEALERKTATFENIVCVLNREVERMSLTAEAYSRQHQLDQEKIETLSNKVRQLERSIG LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK MCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP DVTSSSFQRPITEMNIASGCPLFCPVSVMESKNSYVRDDAIFIKAIVDLTGL NT seq 1419 nt NT seq  +upstreamnt  +downstreamnt atggcagcagcaaactctactccacctggctctttggatttaaaccagcctggatttgca aaggagatactgggaactaaactggaggtcaaatacctctgctctgattgcaagaatata ttgaggaggccgtttcaagctcagtgtggacatcgctactgttcctattgtctgaagaaa attataagtgctggacctcaaaagtgtgccacctgtattcaggaaggaatatatgaagaa ggaatttctattttggaaaaaagctcggctttcccagacaacgcggctcgtcgggaggtg gaaagtctgcctgctgtctgtattaacagtggctgcacttggaaggggactattaaagaa tatgaggctcatggtgaagtttgccctgaatttccactgacttgtgaaggctgtgggaag aagattccaagggagaagtttcgggaccatgtgaagacttgtggcggatctaaagtgcct tgcagatttgaggttgtcggatgtgctgaggtggtggaaaatgaaaagctaccagaacac gaaagcaagtgtttggcggagcatctctacatgctgctgagttttgtgctaagcctcaag gctgggtctggagacctaaagccccttcctgccatttcctcatcacaaaacaactcccca caactggcagcaaactctctgggcttggagtcgaagctctccaagtccctggagctcttg ggaagatgtgaggcccttgagaggaaaacggcaacctttgagaacattgtctgcgtgctc aatcgggaggtggaaagaatgtctctaacagccgaagcctacagccggcagcatcaacta gaccaggagaaaattgaaacactgagtaacaaggtccggcagctggaaaggagcattggg ctcaaagacctggccatggctgagatggaggaaaagatccgcaacatggaagcttccacc tacgacggagttttcatctggaagataacggaatttgccaggaagcgtcaggaggcgata acaggccgctctcctgcgatcttctctccagcattctacacgagcaagtacggctacaag atgtgtctgcgcatttacctgaacggggatggcactgggcgtgggacccatttgtccctg ttttttgtggtgatgaaaggacccaatgatgcgcttctgcggtggcccttcaaccagaag gtaaccctgatgctcctggaccagaacaaccgggagcacatcatcgatgccttccgaccc gacgtgacatcctcctccttccagcgacccatcacggaaatgaacattgccagcggctgc ccactgttctgccctgtctctgtgatggaatccaagaactcctacgtgcgtgatgatgcc atctttattaaagccatcgttgatctcacaggcctctaa

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