Phalacrocorax carbo (great cormorant): 104051398
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Entry
104051398 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104051398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104051398
03032 DNA replication proteins [BR:
pcao03032
]
104051398
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104051398
mRNA cycle factors
Common to processing body (P body) and stress granule
104051398
DNA replication proteins [BR:
pcao03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104051398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
UPF0561
Motif
Other DBs
NCBI-GeneID:
104051398
NCBI-ProteinID:
XP_009510731
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
NTKEAKEPRHRKDNRRPDLEIYKPGLSRLRSKIVPPKHESSEKERSRAEEEESASDKGPS
GGEAPVVEDFDKGDGPKQNGPSQEKEDVETKGGLQSRENLSKQPAPDEWCPKTTRRTKKP
DQQIYQPGKRLHSAAKDPALRSATEEATSKMEQLKVEGDEEAEKGTGKDNNRKTKSSKED
GEGSQAGEGVKASRGEKGRRMERSDRIRRTSDEVMQGKLASTKRYSRSDKRRSRYRTCST
SSAGSNNSVDGALLVDGVDAREXRPRRQLSASSTDSLDDDRIDEAEAYVSXXXXXXTRNS
DKKKRSEQNRASRSESEWSSNGREVKGTFRVTFDSKTMNRDISLADTDKKKPLKAFVSCN
DSEASEARSQSREPQGRGRGILFLPANTDLSASTAGSPEPSHPGPRLLLGGAGSKGPRSR
GRGGTARRLWDPNNPDQKPALKSQTAQLHFLDTDDEVSPTSWGEARQAQTSYYKFQNSDD
PYXQGPQYPYGGYSLQFPMGPSNGVYPGAYXXXXXXXXXXQYMCGPLPPTPLSPEMEQQM
RNMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRVEMLQLYERCILMDIEF
SDTQNVDQLLWKNAFYQVIEKFRQLLKDPQGENAQEIRNKLLQLLDEGTSFFDGLLQKLQ
VSYQFKLEDYMDGMAIRSKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARS
WYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEET
KRKAEQMEQRKHQVLDLSPSRRGKSKKSTLRQVGDDATRLEIWIHPSHPRSSQGHESGRD
SEQDNGLGNLSPSD
NT seq
2564 nt
NT seq
+upstream
nt +downstream
nt
aaaacacgaaggaagcgaaggagccgaggcatcgcaaagacaataggcgcccagacctgg
agatttacaagcctggcctctcccgactgaggagcaaaatcgtgccgccaaaacacgagt
cctcggagaaggagaggagcagagctgaggaggaggagagtgccagcgacaagggccctt
caggaggagaggctccagttgtggaggattttgacaaaggcgacggccccaagcagaatg
gcccttcacaggaaaaagaagatgtagagactaaaggtggtcttcagagccgggagaact
tgtccaagcagcctgctccagatgagtggtgtcccaagaccaccaggagaaccaagaagc
cagaccagcagatctaccagcctgggaaacgcctgcattcagccgctaaagacccggccc
tgcggtcagctaccgaggaagccaccagtaagatggagcagctgaaagtcgagggagacg
aagaggctgagaaaggtactggaaaagacaacaacaggaaaaccaaatcgagcaaggagg
atggggaggggagccaggcgggggaaggagtgaaagcctcaaggggagaaaaaggaagac
gaatggagcgaagcgacaggataaggagaacgagcgacgaggtgatgcaggggaagctgg
cctctaccaaacggtattcccgctctgacaagcgacggagccgataccgcacctgcagca
caagctcagccggaagcaacaacagcgtagatggagccctgcttgtggatggggtggatg
ccagagaanngcgtcctaggaggcagctctctgcatcctccactgactccttggacgatg
acagaattgatgaggcagaagcatatgtctcnnnnnnnnnnnnnnnnnccaccaggaatt
cggacaagaaaaagcgttcggagcagaatcgagcttctaggagtgagagcgagtggagca
gcaatggcagggaagtcaagggaacttttcgagtcacgtttgacagcaagactatgaaca
gggatattagtttggcagatacagacaaaaaaaagcccctgaaggcatttgttagttgca
atgactcagaggcttcagaggcaaggagccagagtagagagccccaagggaggggccgtg
ggattctattcctgcctgccaacacggacctctctgccagcaccgcgggctcccctgaac
ctagtcaccctgggcccaggctcctgcttggcggtgctgggagtaaaggcccccgaagca
ggggccgaggcggcacggctcgcaggctgtgggacccgaacaacccagaccaaaaacccg
ccctgaagagccagactgctcagcttcacttcctagacacggacgatgaagtgagcccca
cctcctggggcgaagcccgccaggcccagacatcctactataagttccaaaactctgacg
atccctacngtcaaggcccccagtatccttacggcgggtactccctgcagtttcctatgg
gtccaagcaacggcgtgtacccaggagcctatnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ngcagtacatgtgtggcccactccccccgactcctctgagccccgagatggagcagcaga
tgcggaacatgcagcagcaggagctcagcaaactcctccgtgaggctgggaaccaggagc
agcagctcagcaatctgctttccagggaccgcatcagcccagaggggctggaaaagatgg
cccagctgagggtggagatgctgcagctgtacgagcggtgcatcctgatggatatcgagt
tctccgatacccagaacgtggaccagctgctgtggaagaacgcgttctaccaggtgattg
agaaattccggcagctcctcaaagaccctcagggggaaaacgcccaagaaattcggaaca
aactgctccagcttctggatgagggcacttctttttttgacggccttctccagaagctgc
aggtgtcataccagttcaagctagaggactatatggacgggatggccatccgcagtaagc
ctctgaggaaaatggtgaagtacgcgctgatcagtgctcagaggtgtatgatttgtcaag
gggacatttgccgatacagagaacaagcaaatgacaccgcaaactacggaaaggcacgca
gctggtacctgaaggctcagcaaattgctcccaaaaacggccgcccgtacaaccagctgg
cgctcctggccatctacacgaggagaaagctggatgctgtctactattacatgcgcagcc
tggctgctagcaaccccatcctcacagccaaggagagcctcatgagtctgttcgaagaga
caaaacgcaaggcggagcagatggagcagaggaaacatcaggtgttggatctgagcccca
gccgccgggggaagagcaagaagtcgacgttgcgacaagttggggatgatgccacgcggc
tggagatctggatccatccttcccacccccgctcctcccagggccacgagtccggcaggg
attctgagcaggacaacggtcttgggaacctcagccccagcgac
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integrated database retrieval system
