Phalacrocorax carbo (great cormorant): 104051886
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Entry
104051886 CDS
T08596
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao00310
Lysine degradation
pcao01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104051886 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104051886 (SETDB1)
Enzymes [BR:
pcao01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
104051886 (SETDB1)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104051886 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104051886 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
Pre-SET
MBD
SET
Chromo_MORC2_6th
RLL
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
104051886
NCBI-ProteinID:
XP_009511325
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MDFQEIQELQQEVMEALGISMEELQDIIDKELEKFECVKQRKQQLEELEKCVKQKEEEVA
RVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAQPMEVIEIPDEDDDDVM
SIDSGWKHSSVSRGRITKDQTLLREAMAAMRKSAQDVQKFMDAVNKKTNAQDVQKDAQTP
QETPGALQPIGPAASGSDLSNDGDLKVGMRILGKKRTKTWHKGTLIAIRTVGAGKKYKVK
FDNKGKSLLSGNHIAYDYHPSPENHYVGSRVVAKYKDRNQVWLYAGIVAETPNVKNKDRF
LIFFDDGYASYVKEWELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKNGQL
IKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKKQ
SGQARTRPNVDLNDLRGTENSGSVVGLGGHGPNLIKLSHGQVAHVPPAARGPSGTFSEVQ
ASAKGGLDEGGTRPCDEGSVLESTRVPECSDSQLAQSRKQVAKKSTSFRPGSVGSGQSSP
SSPVLSDTPPAGRTGASQQHRLSSSQAGSGTAQAFHGMMDRVPNEPSYRAPLEKLFYLPH
VCSYACLSRVRPIRSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCXX
XMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNE
IDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPG
GQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQLFKTQNKGWG
IRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKC
SSDSSGVDLKDEEEENTGTDEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKE
NGMSETASKDSGLTRQISHDEMAVAAMAVPASCKLPVSEETSKNKVASWLSSNSMSDGFQ
DNDSASSFKMSEGGEAKASKTEVPGEREKASTSALGDVDGESKAVKKDVRQEPEEPSKIP
GLSDLGRMYGYNPSPPKLEGVRRPTSKTALLQSRRHSLVQPATEDVLTLSSSTDSDGENG
QAVTGQAQGAANDSDDVQTISSGSEEEEGDDKKNPSSGSGPVKRQVAVKSARGFALKSTH
GIAIKSTNMAAADKGESAPVRRTTRHCSPNLFVQNVFVDTHDLRFPGSAGPSSWAV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatttccaggagatccaagagctgcagcaagaagtgatggaggcactgggaatctcc
atggaggagctccaggatatcatcgacaaagagctggagaagtttgagtgtgtgaagcag
aggaagcagcaactggaggagctggaaaagtgtgtgaaacagaaggaagaagaggtggct
cgtgttgaccggctctttgatgacgcttcgagagccattgataaatgtgagatactggtg
aaggatctgtactccaagctgggcctccagtaccgtgagagcagctctgaggacgaggac
ttggctgcccagcccatggaagtgattgagatcccagatgaggatgacgatgatgtcatg
agtatcgattccggctggaagcacagttcagtatctcgtggtagaatcacaaaggatcag
actctgctgcgggaagccatggctgcaatgagaaagtctgcccaggatgttcagaaattt
atggatgctgtgaacaagaaaacaaatgcccaggacgtgcaaaaagatgcacagacccct
caggaaacccctggcgccctccagcccattggccccgcggcgtctgggagcgatctcagc
aacgacggtgatctgaaagttggcatgaggatcctgggcaagaagagaaccaaaacgtgg
cacaaaggaactctgatcgcgatccggacggtcggtgctggaaagaagtacaaagtgaaa
tttgataataaagggaagagcctgctttctggcaatcacatcgcttatgactatcacccc
tcacctgagaaccactacgttggcagcagggttgtggcaaaatacaaagatcggaatcag
gtttggctgtacgctggcatcgtggctgaaaccccaaacgtaaagaataaagacaggttc
ctgatcttctttgatgacggctacgcttcctatgtcaaggagtgggagctgtacccaatc
tgcaggccactgaaaaagacctgggaagacatcgaggacatttcctgtcgcgatttcatt
gaggagtacatcacggcctaccccaaccgccccatggtgctgctgaagaacggccaactg
atcaaaacggagtgggaagggacctggtggaaatccagagtggaagaagtggatggcagt
ctggtcaaaatccttttcctggatgacaaacgctgtgagtggatttaccggggttccacg
cgcctcgagcccatgttcagcatgaaaacttccacagcctccacccaagaaaagaagcaa
agtgggcaagcaaggactcgtcccaacgtcgacctcaatgacttacgaggcactgagaac
tcgggatcagtggttggtctcggtggtcacggaccaaacctgataaagctcagccacggc
caagtcgcacacgtgcctcctgctgccaggggcccaagcgggacgttctcggaggtgcag
gctagtgccaaaggaggcctggatgaaggaggaactcggccttgcgatgaagggagcgtg
ttggagagcaccagggtacctgagtgctccgacagtcagctggcccagtcgagaaagcaa
gtggccaagaaaagcacatccttccgtcctggctccgtgggctccgggcagtcgtcgcct
tcttcgcctgtcctaagtgatacacctccagcgggaaggaccggcgcctcccagcagcat
cggctctccagcagccaggcaggcagcggcacggcgcaggccttccatggcatgatggac
cgcgtgcccaacgagccctcttaccgagccccgctggagaagctcttctacctgccgcac
gtctgcagctacgcctgcctgtcccgcgtccgtcccatccgcagcgaccagtaccgcagc
aagaaccccctgctcatcccgctgctctacgacttccgacggatgacagcccgccgacgg
gtgaaccgcaagatgggcttccacgtcctctacaagacgccgtgtgggctgtgcnnnnnn
nccatgcaggagatcgaacgctacctttttgagacagactgtgacttccttttcctagag
atgttctgcctggacccgtacgtcctggtagatcgcaagttccagccctacaaaccctac
tactacatcgcagacattaccaagggcaaggaggatgtgccgctgtcctgtgtcaacgag
atcgataacactccacctccgcaggtggcctacagcaaagagcgcatccctggcaaaggg
gtttacatcaacaccagctgggagttcctcgtgggctgtgactgcaaagacgggtgcaga
gacaaatcgaaatgtgcctgtcaccagctgacagtccaggccactggctgcaccccaggt
gggcagatcaaccccaactcaggataccagcacaaaaggctggaagaatgcctcccgaca
ggagtttacgagtgcaacaagaggtgcaagtgcaacattaacatgtgcaccaaccgcttg
gtccaacacgggctccaagtccggctgcagttattcaagacgcagaacaaaggctggggc
attcgctgccttgatgatattgctaaaggctcttttgtctgcatctacgcaggaaaaatc
ctcacggatgacttcgccgacaaagaggggttagagatgggtgacgagtattttgcaaac
ctggatcacattgagagcgtggagaacttcaaggagggctacgagagcgacgcaaaatgc
tcttctgacagcagcggggtggacctcaaggacgaagaggaggaaaacacaggcactgat
gagcaggaggagtccaacgaggacagctctgatgacaacttctgcaaggacgaggacttc
agcaccagctcggtatggcgcagctatgccacgcgacggcagacccggggccagaaggag
aacgggatgtcggagacagcctccaaggactcggggctcacccggcaaatcagccacgat
gagatggcggtggctgccatggcggtgcccgcctcctgtaagctgccggtgtcggaggag
acctccaagaacaaagtggcctcatggctgagctccaacagcatgtctgatggcttccag
gacaacgacagcgcctcctccttcaagatgagcgaaggcggcgaagccaaggccagcaaa
acggaggtccccggtgagagagagaaagcttccacttctgccctgggtgatgtggacgga
gagtcaaaggcggtgaagaaagacgtaaggcaggaacctgaagaaccatccaaaattccc
gggctaagcgacctgggaaggatgtatggctacaacccaagccctcccaagctggagggg
gtccggaggccgacgagcaagacggccctgctccagagcaggcggcattccctcgtgcag
cccgccacggaggacgtgctgaccctgtcgagcagcacggacagcgacggggagaacggg
caggcggtgacggggcaggcccagggcgccgccaacgacagcgacgacgtccagaccatt
tcctcgggctccgaggaggaggaaggggacgacaagaaaaatccctcgtctgggtcaggt
cctgtgaagaggcaggtggcagtgaaatccgcccgaggctttgccctgaaatcaactcac
gggatcgccatcaagtcaaccaacatggcagcggccgacaagggggagagcgcgcccgtc
cgcagaaccacccgccactgcagtcctaacctcttcgtgcagaacgtctttgtggacacg
cacgacctccgcttcccgggctcggctggacccagctcctgggccgtgtga
DBGET
integrated database retrieval system
