Phalacrocorax carbo (great cormorant): 104052405
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Entry
104052405 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: msx2-interacting protein-like
KO
K25100
Msx2-interacting protein
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
104052405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104052405
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
104052405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINT_MID
MINT_RID
RRM_1
SPOC
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
104052405
NCBI-ProteinID:
XP_009511962
LinkDB
All DBs
Position
Unknown
AA seq
3046 aa
AA seq
DB search
MQIEVTAWIGPETESENEFRPLDERIDEFHPKATRTLFIGNLEKTTTYHDLRNIFQRFGG
IVDIDIXXXXXXXXXLQYCDIASVCKAIKKMDGEYLGNNRLKLGFGKSMPTNCVWLDGLS
TNVTDQYLTRHFCRYGPVVKVVFDRLKGMALVLYNEIEYAQAAVKETKGRKIGGNKIKVD
FANRESQLAFYHSMEKTGQDIRDFYEMLAERSRDERRGSYEYAPDRTYYETVRTPGTYPE
DPRREYPARGREFYAEWDPYQGDYYDPRYYDDPREYRDYRGDPYEQDIREYSYRQRERER
ERERFESDRDRDHERRPIERSQSPTHSRRPQSPGASPSQSERLQSDSERRIYSRSSDRSG
SCSSLSPPRYDKLDKARVERYAKNEKTEKERAFDQDRVDKEKRLVRKEKPEKLEKEKTDK
QKRKAKIHSPSSQSSETDQENEREPSPEKLKGNSKQSKERGDKEGTAKNRLELMPCVVLT
RVKEKEGKVIDQPALEKLRAKLDNDTMKSPLLEQKTQTSQAEQTKSDQSKLEPVRTKVQK
EKALASHVEVVDKEGKLKPKKHLKIEQTSEGANAVDLDKLEARKRRFADANLKPDRQKLE
VKRSSQDEEDARMVLKKQLDATASSREATMLREGELERKPLRKEVLKRESKKLKLERLLP
VTSPKEIQETLTVGGIGMRPTLDLQARLMETPDEPAEVQEISSKKPNPVKPQHKQVQLLD
DQGTEREDTRKNYSGLPEETPDHKLGQEKPQSTDTEEKIGIDIDHTQSYRKQMEQSRRLK
QQLEMEIAKSEKFGSPKKDVDEYERRSLVHEVGKPPQDVTDDSPPSKRKKTDQFDFEIST
KRERNYRSSRQVSEDSERTSCSPSIRHFPFHEDDDTLDSPRLMPLKETKESPKIEEKGLS
YSNMTVREDSLKFNPYDSSRREQMAEMAKIKLSVLSSEDDSSRWETQVKQEPGRVDISFP
SSIVKRDSIRKRSVRDLEPGEVPSDSDDDSENKPHSPKASSLLESSRLSFLLRDREEKLR
ERDERLSSSLERNKFYSFALDKTITPDTKALLERAKSLSSSREENWSFLDWDSRFASFRN
NKDKEKVDSAPRPIPSWYMKKKKIRTDSEGGKLDDKKEDHKEEEQERQELFASRFLHSSI
FEQDSKRLQHLERKDDDLDFISGRLYGRQSSSDGTNSAADLVQEPVVLFHSRFIELTRMQ
QKEKEKDQKPKEAEKQEDKENRPKTPETVPDSKEPEHKTSSAVGPSSVAVLPQEPAPVAS
EKVANEKVVVETAAVKEEKPSEPASTAEEQKPFPELAAPVKIEPPEQTEPLPVAEASKEV
VATTLAPEEDAVATEHPSYLDTKPPTPGASFPQADISVDPEPDAAQLIPPPPKLVQKSDE
AAEPKEENPLPSANADASASQKVEAAAEVLPPVSDNDMEVEPPVVVKDKKSYKSKRSKTP
VQSAAANVTEKPVTRKSERIDREKLKRSSSPRGEMQKLSELKVEAEKVSRNAAKSPSSAA
EPENVEPSLPIGRTRRRNVRSVYATTGDNEGPSPVKDSMEVTRSTRKRGEKETQETVTTV
PTTPRRGRPPKTRRKPEEDISPIKTEPVQQELEEAETKDAVEAPKPAEGWRSPRSQKLTH
SHSSAATSQQGKKGKNEPKADIAAESEDTAERSGQESSIGDNGNKAKATEKEPAVSEQKR
ERKELDAEKNQLEIPTVEIIEKKPVPEKVTKSKRGRYKNTKTVVDKASVCLKNVEIRLNV
DEVKGALRPTEEEAEPVAVSPAKMKSPQKDDILPPHFAKNEVEDSFPETEKEVMREPKQS
PEAAQLAKQIELEQAVENIAKLTETPPSIAAYKEPTADVPEVRQEEEGDKPAHQASETEL
AAAIGSIINDISGETESFPAPPTYPAESEAEIPAEPLVLPSPREEMEPETDQAVNNILET
EAAVEPTGQTGPRSAPSAVETESKEAEVSFSESSNSAQEAETLQEAEVARKEKGRQKTTR
QRRKRSTGRKGDTAEVNTFEPERVQSKSPPANEPPVPLDEGSQSGFKIRSPMENAPVTPP
SAPNAALPAVPSAVAATKLPTPXVPLHSGPAKLPEWMVRHEEPRAHSTPPPALPPDTKAS
DIDTNSSTLRKILMEPKYVSATSITSTHVTTTHAEPVSAPRLEEAPLHPAVEAIKPVSEE
KPAVPVTNALDPPVAEAPVFSEKEKISTVIAPKATSVISRMPHSVDLEEAPRIALVKQAP
QTQTCLVNAPSPKFKQRSSTNDNSRFHPGSMSIIEERPVETGSSPGLREVVVLLIYSGQK
TEGPQRISAKISQIPPASAVDIEFQQSVSKSQIKQEPITPSQPTPKGSQTSAGYGTVSTH
SSLVLGTQPYNTSPVIASVKQERTALEKSDSSHLSVQTPASQPGKVLTQTVNTPPVLVHN
QMVVNKKLSDPAALKVETKTLQPSNLSPGVSPHHPSLSGKMHSEANHVSSGPSTPTDRAI
SHLGVTKQEPHSPRTSGHSPSPFPRACHPGSTSSPALSSSTPVMLAPGIPVPQYISSMHP
EQSVIMPPHSVTQTVSLGHLSQGEVRMNTPPLSGIPYGIRPEALHSPRAALQPQIEIKPQ
RSSTPQPAPIRDIVMPPLSSQHAPEEEMHYHHTTVCRGPAPVQSDVLVMQPDYRMHPTSI
RLDQYNVPRDVRIVRMIMHPHMAAVGEHHSETRQSRTPEGAVKTPPVSKTPQPGKETPKS
SEGKMAHSPHSEPRLLSVPSSSQLPGLPLTQPVVVPHGVQIMHPAGSSFHDYRSVYGDMR
NYHTAAQLGHPQFPGASPIGLPSRSMTPSQGLPEGEHSHPSQPVRSKTPQIPQDPKGPPA
AGPEQSHHPTVNRHAAPIDPHVHLQRAQADTGQTSYPSPVAISMKQELPSPHQPQAVPKQ
SMFIPTTSGPGAPPGLPLNRPEPQSALKQEPSPHPVSQRPVDMVQLLTKYPIVWQGLLAL
KNDTAAVQLHFVSGNNVLAHRSLPAPEGGPPLRIAQRMRLEASQLEGVARRMMVESDYCL
LLALPCGRDQEDVVNQTESLKAAFISYLQAKQAAGIINVPNPGSNQ
NT seq
9138 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgaagtcacggcctggatagggccagaaacggaaagtgagaatgaatttcgt
cctttggacgaaaggatagatgaatttcacccaaaagcaacaagaactcttttcatcggc
aacctggagaaaacaaccacctaccatgaccttcgcaacatctttcagcgcttcggtggg
atagtggatatcgacattannnnnnnnnnnnnnnnnnnnnnnnncctgcagtactgtgat
attgcaagtgtgtgtaaagcaattaagaagatggatggggaatatcttggaaataaccgg
ctcaagctgggttttggaaagagcatgcctacaaactgcgtgtggttagatggtctttct
acaaacgttacggatcagtatttaactcgacatttctgccgatacgggcctgtggtaaag
gtggtgtttgaccgcttaaaaggcatggccctggttctctacaatgagattgaatatgca
caagcagctgtaaaagagaccaaggggaggaaaatcggtgggaataaaattaaggtggac
tttgcaaatcgagaaagtcagttggcattttatcattccatggagaaaacgggtcaagat
atcagagacttctatgaaatgctggcagaaagaagcagagatgaaagaagaggatcttac
gaatatgcccctgatcgtacttactatgagactgttcggactccagggacatatcctgaa
gatcctcggcgagaatacccggctcgaggcagagaattttacgcagagtgggatccctac
caaggagactactatgacccacgatactatgacgacccacgcgagtacagggattacagg
ggcgatccgtatgagcaagacataagggagtacagttacaggcaacgggagagagagagg
gagagggaacggttcgaatctgatcgggacagagaccacgaacggagacccattgaacgg
agccagagtccgacacactccaggcgtccgcagagtcctggagcctctccctcgcaatcg
gaaaggctgcagagcgattcggagaggaggatttacagcaggtcatcggatcgcagtggc
agctgcagctctctgtctcctccacgatacgacaagctcgacaaagcccgcgtggaacgt
tatgcaaaaaacgaaaaaacagagaaagagcgcgctttcgaccaggacagagtcgacaag
gagaaacgcttggtgagaaaggagaagccagaaaaattagaaaaggagaaaaccgataag
caaaaacgaaaagcaaaaatccattcgcccagctctcagtcttctgaaacggatcaagag
aatgagagagagcccagccctgaaaaattgaagggcaacagcaaacaaagtaaagagaga
ggtgacaaagaagggacagctaaaaaccgcctggaactaatgccctgcgttgtgttgacc
cgagtaaaagaaaaggaagggaaagttattgatcagccggctttggagaaactgagggca
aagcttgataacgacactatgaagtccccacttcttgaacaaaaaacacagacgtctcaa
gctgagcaaaccaagtctgatcagtctaaactggaacctgtcagaaccaaggtacaaaaa
gagaaagcccttgccagtcacgtagaagtggtggataaggagggaaaactgaagcccaaa
aagcacttgaagatagagcaaacttctgagggggccaatgcggtagatttagataagttg
gaggctcgtaaaagacgttttgctgatgcaaatctgaagcctgacaggcaaaaactggaa
gtaaaaagaagcagccaagatgaggaagatgcacgcatggttttgaaaaagcagcttgat
gcaacggcttcgtctagagaagcgacaatgttaagggaaggagaattggagagaaaaccc
ctgcggaaggaggtgcttaaaagggaatctaaaaaactgaaactggaaagacttcttcct
gttactagtcccaaagaaattcaggagactcttactgttggtgggatcggcatgcgtcct
accctagatctgcaggcgaggttaatggagacacccgatgaaccagcggaagttcaggaa
atctcttctaagaaaccgaatccagtaaaaccccagcataaacaggtgcagctactagac
gaccaaggaacagagagagaggacacaaggaagaactactctggtcttcctgaagaaaca
cctgaccataaacttggccaagagaagcctcagtcaactgatacggaggagaaaattggc
attgacatcgaccacacgcaaagctacaggaaacaaatggagcaaagtcgcaggttaaaa
cagcagctggaaatggagatagcgaagtctgagaagtttggcagtccaaagaaagatgtg
gatgaatatgaaagacggagcttggtccatgaggtgggaaaacctccacaagatgtcacc
gatgactctcctccaagtaaaaggaaaaagactgaccagtttgactttgaaattagcact
aaaagagaaagaaactatagaagttctcgtcaggtgagtgaggactccgaacggacatcc
tgctcccctagtatcagacacttccctttccacgaggacgatgacacgctcgattctcca
aggctaatgccgttaaaggaaaccaaagagtcgcctaaaatagaagaaaagggcctttcg
tactccaacatgactgtgagggaggactcgctgaaattcaatccgtacgattccagcaga
agggagcagatggcagaaatggctaaaataaaactatccgtgctgagttctgaagatgac
tcgagtaggtgggaaacacaagtgaagcaagagcctggtagagttgatatcagctttcca
agcagcatcgtcaaaagagacagcatacgcaagcggtctgtccgagacctggaacccggg
gaggtgccttcagattcggatgatgacagtgaaaacaaaccccattccccgaaagcctca
tccttgttagagagttccaggttgtcttttttattaagggacagagaagagaagttacgt
gaaagagatgaaagactgtcaagttccttagaaagaaacaaattctactcttttgcgttg
gacaagacaatcacaccagacacaaaggccttgctggaaagagctaaatctctctcttcg
tccagagaagaaaactggtcctttctagattgggattcaagatttgctagttttagaaac
aataaagacaaagagaaggttgactcagctccgagacctattccatcttggtatatgaaa
aagaaaaaaatcaggaccgattctgaaggtgggaaactggatgataagaaagaagatcat
aaagaggaggaacaagagagacaggaactgttcgcttctcgttttttgcatagttcaatc
tttgaacaggactccaagcgcctgcagcatttagagagaaaagacgatgatctcgacttc
atttctggtagattgtatgggagacagtcttcctctgatgggactaacagcgcggcagat
ttggtgcaagaaccggtggttctcttccacagtaggttcattgaactaacgcggatgcag
cagaaagaaaaggagaaagatcagaaaccaaaagaagcggaaaaacaggaagataaagaa
aaccggccgaaaacaccagaaacggttcctgacagtaaagaaccagaacataaaacttcc
tcagcggttggtccctcttcagtcgctgtcctaccacaggaaccagcaccggttgcttct
gagaaggtagcaaatgaaaaggtagtggtggaaacagctgctgtgaaagaagaaaaacca
tctgaaccagcttctacagcggaggaacaaaaaccttttcctgaacttgctgctcctgtc
aaaatcgaaccacctgagcaaaccgaacccctgccagtcgcagaagctagtaaagaagtt
gttgctacaaccttggcaccagaggaggatgctgtggcaacggagcatccttcgtacttg
gataccaagcctcctactcccggagcttcgtttccccaagcagacatcagtgtagatcca
gaacctgatgctgcccagttgatcccacctccgcccaagctagttcagaagtccgatgag
gctgccgaacctaaagaagaaaaccctctgccttctgccaacgctgatgctagtgcgagt
caaaaggtggaggcggctgctgaggtcctgccgcccgtttctgacaatgatatggaagtc
gaacctccagttgttgtaaaagataaaaagtcctacaagagtaaacgctccaagactccc
gtgcagtcggctgcagctaacgtcacagaaaagcctgtcacgaggaagagtgaaagaatt
gaccgtgaaaaactcaaaaggtcaagttctccccgtggggagatgcagaagctttccgaa
ttgaaagtggaggcagagaaggtttcgaggaatgctgctaaatctccaagttctgctgca
gagccagaaaacgtggagccaagcttgccaataggccggactaggcgcagaaacgtcagg
tcggtctacgctaccactggggacaatgaaggcccatctccggtgaaggactccatggag
gtcactaggtccactaggaagagaggggaaaaggaaacgcaggagacagtgacaactgtt
cctacgaccccgaggaggggaagacctccaaagacccgccgtaagccagaggaagacatc
tcaccaataaagacagaaccggtacagcaagagctggaggaggctgaaactaaagatgct
gtggaagctcctaagcctgcagaaggttggaggtctcctagatcccagaagctaacacac
agtcactcatcagctgctaccagccaacaggggaagaaagggaagaacgaaccaaaagct
gatattgcggctgaatctgaagatactgctgaaagaagtggtcaggaatcgagcattggt
gacaacggtaataaagcaaaagccactgagaaagagccagcagtgagcgagcagaaacgt
gagaggaaagaactggatgcggagaaaaaccagctagaaatccccacagttgagatcatt
gagaagaagccggtaccggaaaaggttacgaaatccaaaaggggaaggtataaaaatacc
aaaactgttgtagataaagcatctgtgtgtctcaaaaatgtagaaatacgcctcaatgtg
gacgaagtcaagggcgccctgcggccaactgaggaggaggcagagccggtggcagtgtcg
ccagccaaaatgaagagcccccagaaagatgacatcttgccaccccattttgctaagaat
gaggtagaagattcgttccccgaaacagaaaaggaggtgatgcgggaaccaaagcagtcc
cctgaagctgcccaattagcaaaacagatcgaactcgagcaggccgtggagaacattgca
aaactcaccgaaactcctccatcaattgctgcctacaaagagccgacggcagatgtgcct
gaagttcgtcaggaggaggaaggagataaacccgctcatcaggctagtgaaaccgagctg
gcagcggccatcggctccatcatcaatgatatttctggggagacagaaagctttcctgca
cccccgacgtatcccgctgaatcagaagctgaaatccccgcagagcccttggtgttaccg
tcgcctcgggaggagatggagcccgagactgatcaggcagtgaataacatcttagaaact
gaggctgccgtcgagcccacggggcagacgggtccccgctcngccccgtcggctgtagag
acagagagcaaggaggccgaagtcagcttcagcgaatcatccaactctgcgcaggaggcc
gagaccttgcaggaggctgaagttgctcggaaggaaaagggccgtcagaaaaccacgcgg
caaaggcgcaaaaggagcacgggcagaaagggcgacactgctgaggtcaacacctttgag
ccggagagggtgcagagcaagtcaccccccgcaaacgaaccaccggttcccctcgatgag
ggaagtcagagtgggttcaagatacggtcgcccatggagaacgcacccgtcacgccgccg
agcgccccaaatgcagcccttcctgctgtcccttcagccgtggccgcgaccaagctgccc
accccgnccgtcccccttcactctggccctgccaagttgccagagtggatggtaaggcac
gaggaaccccgtgcccattccacgccccctcccgctctcccaccagacacgaaggcatca
gatattgatacaaactccagcactttgaggaagatacttatggagcccaagtacgtctca
gcgacgagcataacctccacgcacgtgacgacaacgcacgctgagccggtgagtgcgcct
cgtttggaggaggcacccctccaccccgcagtagaggccataaagccagtttcagaggag
aagccagcagttcccgtcaccaacgccttggacccaccagtggccgaagcaccggtgttc
agcgagaaggaaaagataagtactgtgattgctcccaaagccacttctgttataagcagg
atgccccacagtgtggatctggaggaggctccgaggatcgccttggtgaagcaagctccc
caaacccagacgtgtctcgtcaacgccccctcgccgaaatttaagcagaggtcaagcaca
aatgataacagcaggtttcatccggggtcgatgtctattatcgaggagaggcctgtagag
actgggtccagtccggggctgcgggaagttgtggtgcttctgatttactcagggcagaag
acggaaggccctcagcgaattagtgccaagatcagccagattcccccagccagtgctgtt
gacatagagtttcagcagtctgtatccaagtctcagattaaacaggaacctatcacgcca
tctcagccaacgccgaaaggctcccagacctcggcaggctacgggactgtttccacccat
tcttctttggtactaggaactcaaccttacaatacatcgcctgttatcgcctccgttaaa
caagagcgcactgcgctggagaagtctgactcatcccacctttctgtccagactccagcg
tctcagcctggtaaagtcctcacacagactgtaaacactccacccgtactcgtccacaac
cagatggttgtgaacaaaaaactgtccgatccagctgccctgaaagtggagaccaagaca
ctgcagccctccaacctgagtcctggagttagtcctcaccatccttccctctctgggaaa
atgcattcggaagcaaaccacgtcagctcaggacccagcaccccaaccgaccgggctatt
tcccacttgggggtcaccaaacaggagccgcactcgccgcgtactagcgggcactcgcca
tcgccgttcccccgggcttgtcatcccggcagtacctcatctccggctctatcgagcagc
accccggtcatgctggcgccgggaattcccgttcctcagtacatatccagcatgcacccc
gagcaatctgttatcatgccccctcacagcgtaacacagactgtgtccctgggccatctg
tcccaaggcgaggtgagaatgaacacccctcctctctccggcatcccttacggcatccgc
cctgaagcgctccactctccccgagctgctctgcaaccccagatagagatcaaacctcag
cgatccagcacgccccagccagctccgatacgggacatagtcatgcctcctttgtcttct
cagcatgcccccgaggaggaaatgcactaccaccacaccacggtgtgcaggggaccagcc
cccgttcagtccgacgtcctggtgatgcagccagattaccgtatgcaccccacgagcatc
aggctcgaccagtacaacgtcccccgggacgtgaggatcgtgaggatgatcatgcacccg
cacatggccgctgtgggcgagcaccactcggaaacgagacaatcccgaacgcctgaaggg
gctgtgaaaactccccccgtcagcaagaccccacagcccggaaaagagacaccaaaatcc
tccgaaggcaagatggcacactctcctcacagcgaaccccggctcctcagtgtcccttcc
agcagccagctgcctggactgcctttgacgcagccggtggtggtaccgcacggggtacag
atcatgcaccccgcggggagctcctttcacgattatcggtctgtgtatggagacatgagg
aattaccatacggcggcgcagctcgggcatcctcagttcccgggtgcctcgccgatcggg
ttgccttcccggagcatgaccccatctcagggtctaccagagggcgaacactcgcaccct
agccagccggtacgcagcaagactcctcagatcccccaggatcccaagggcccgccggca
gcagggcctgaacagagtcaccaccccactgtaaataggcatgcggcaccgatagaccct
cacgtccaccttcagagggcacaagcggacacgggccagacctcctacccctcccccgtt
gccatttcgatgaaacaggagcttccgtcaccacatcaacctcaggcggtgcccaagcaa
tccatgttcatcccgacgacgtcgggtcccggggcgccgccggggctgcccctcaatcgc
cctgagccccagtctgctctcaaacaagagccgtctcctcaccccgtttcgcagagacct
gtggatatggttcagcttctgacgaaatacccgattgtctggcagggccttttggctcta
aaaaacgacacagccgctgttcagctccacttcgtctccggtaataacgtcttggcgcac
cggtccctgccggcgccggagggagggccaccgctgagaatcgcgcagcgcatgcgactg
gaggcttcgcagctggagggcgtcgcgcgcaggatgatggtggagagcgattactgcctg
ctactggccttgccttgtggccgagaccaggaagacgtagtgaatcagacggagtcactc
aaggctgcgttcatcagctacctgcaggcgaagcaagctgcaggaatcatcaacgttccc
aaccccggctctaatcag
DBGET
integrated database retrieval system
