Phalacrocorax carbo (great cormorant): 104052981
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Entry
104052981 CDS
T08596
Name
(RefSeq) actin, cytoplasmic type 5 isoform X1
KO
K05692
actin beta/gamma 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03082
ATP-dependent chromatin remodeling
pcao04145
Phagosome
pcao04210
Apoptosis
pcao04510
Focal adhesion
pcao04520
Adherens junction
pcao04530
Tight junction
pcao04810
Regulation of actin cytoskeleton
pcao04814
Motor proteins
pcao04820
Cytoskeleton in muscle cells
pcao05100
Bacterial invasion of epithelial cells
pcao05132
Salmonella infection
pcao05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104052981
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104052981
09143 Cell growth and death
04210 Apoptosis
104052981
09144 Cellular community - eukaryotes
04510 Focal adhesion
104052981
04520 Adherens junction
104052981
04530 Tight junction
104052981
09142 Cell motility
04814 Motor proteins
104052981
04820 Cytoskeleton in muscle cells
104052981
04810 Regulation of actin cytoskeleton
104052981
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104052981
09171 Infectious disease: bacterial
05132 Salmonella infection
104052981
05100 Bacterial invasion of epithelial cells
104052981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcao03021
]
104052981
03019 Messenger RNA biogenesis [BR:
pcao03019
]
104052981
03036 Chromosome and associated proteins [BR:
pcao03036
]
104052981
03029 Mitochondrial biogenesis [BR:
pcao03029
]
104052981
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcao04812
]
104052981
04147 Exosome [BR:
pcao04147
]
104052981
Transcription machinery [BR:
pcao03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104052981
Messenger RNA biogenesis [BR:
pcao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
104052981
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
104052981
NuA4 complex
104052981
Chromatin remodeling factors
BAF complex
104052981
PBAF complex
104052981
GBAF(ncBAF) complex
104052981
SWR1 complex
104052981
Mitochondrial biogenesis [BR:
pcao03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
104052981
Cytoskeleton proteins [BR:
pcao04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
104052981
Exosome [BR:
pcao04147
]
Exosomal proteins
Proteins found in most exosomes
104052981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
104052981
NCBI-ProteinID:
XP_009512649
UniProt:
A0A093SKQ2
LinkDB
All DBs
Position
Unknown
AA seq
376 aa
AA seq
DB search
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgaggagattgctgccctcgtggtggataatggctctggcatgtgcaaggca
ggctttgcaggggatgatgccccccgtgctgtgtttccctccattgtggggcgtccccgg
catcagggtgtcatggtgggcatggggcagaaggacagctatgtgggggatgaggcccag
agcaagaggggcatcctcaccctgaagtaccccattgagcacggcattgtcaccaattgg
gatgacatggaaaagatctggcaccataccttctacaatgagctgcgtgttgccccagag
gaacaccctgtcctgctcactgaggcccccctgaaccccaaggccaaccgggagaagatg
acccagatcatgtttgagaccttcaacaccccagcgatgtatgtagccatccaggctgtg
ttgtccctctatgcctccggccgcaccactggcattgtcatggactctggggatggcgtc
acccacaccgtgcccatctatgaaggctacgcactgccccacgccatcctgcgtctggac
ttggctggccgcgacctgactgactacctcatgaagatcctcacggagcggggctacagc
ttcaccaccacggccgagagggagattgtgcgggacatcaaggagaagctctgttatgta
gctctggactttgagcaggagatggccacagcggcctcatcctcctccctggagaagagt
tatgagctgcctgatgggcaagtgatcaccattgggaacgaacgattccgatgccctgag
gccatattccaaccctccttcctgggcatggagtcttgcggcatccatgagaccaccttc
aactccatcatgaagtgcgatgtggacatccggaaggacttgtatgccaacaccgtcctg
tctgggggtaccaccatgtaccctggtattgctgacaggatgcagaaggaaatcacggcc
ctggcacccagcaccatgaagatcaagattattgccccaccggagcgcaagtactctgtc
tggattggcggctccatcctggcatctctctccaccttccagcagatgtggatcagcaag
caagagtacgatgagtctggcccctccatcgtccatcgcaagtgcttctag
DBGET
integrated database retrieval system
