Phalacrocorax carbo (great cormorant): 104053062
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Entry
104053062 CDS
T08596
Name
(RefSeq) LOW QUALITY PROTEIN: otoferlin-like
KO
K19949
otoferlin
Organism
pcao
Phalacrocorax carbo (great cormorant)
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcao04131
]
104053062
Membrane trafficking [BR:
pcao04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
104053062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Med19
Motif
Other DBs
NCBI-GeneID:
104053062
NCBI-ProteinID:
XP_009512742
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MHQPGCNAETSLSCKKNPRKAGKGVFSAMKLGKTRPSKDDHRKQDEPAVLEAEDLDRKAT
RRACGLEPDTISLASVTAVTTNVSNKRSKPDIKMEPSAGRPMDYQVSITIIEARQLVGLN
MDPVVCVEVGEEKKYTSMKESTNCPYYNEYFVFDFHVPPDVMFDKIIKLSVIHSKNLLRS
GTLVGSFKMDVGTVYTQPEHQFYHKWAILSDPEDLTAGLKGYLKCXGKGDNIKTPHKANE
TDEDDIEGNLLLPDGVPPERQWARFYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDP
YVQVVFAGQKGKTSIQKSSYEPLWNEQIVFTEMFPPLCKRIKIQIRDSDKVNDVAIGTHF
IDLRKISNEGDKGFLPTFGPAWVNMYGSTRNYTLMDEHQELNEGLGEGVSFRARLLMSLA
VEILDTTNPEINSSTEVQVEQTTSVADNCTGKMEEFFLFGAFLEATMIDRKIGDKPINFE
VTIGNYGNQIDGTTKPTLRRKKEGGDGDEEESELLQNSSDDEGDEDGELVSVSSSQPMKP
LVTDRNYFHLPYFEKKPCIYIKSWWQDQRRRLYNANIMDKIADKLEEGLNDVQEMIKTEK
AHPERRLRGVLEELTSGCLRFVMLADKDQQHSSRTRLDRERLKSCMRELENMGQQATTLR
SQVKKNTMKDKLKLVQNFLQKLRFLADEPQHTIPDVFIWMMSNNKRIAYARIPSKDILYS
IVDEEMGKDCAKVKTIFLKLPGKRGFGPAGWTVQAKMEMYLWLGLNKQRKDFLSGLPCGF
EEKKTARGQNLPSFPPISLLYTKKQVFQLRAHMYQARSLFAADSSGLSDPFARVFFISQS
QCTEVLNETLCPTWDQLLVFDNVELYGEAHEMRDDPPIIVIEIYDQDTVGKADFMGRTFA
KPVVKMSDERYCPPRFPPQLEYYQIYRGNSTAGDLLAAFELLQIGPGGKTDLPPIDGPTD
MDRGPILPVPLGIRPVLSKYRVEILFWGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIQ
NYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSSLRKFIYRP
PDKKAQHWNMTAKHLNGYLAVANRAYRSRPTGEIVVNMEPEVPIKKMETMVKLEANSDAV
VKVDVSEEEKEKKKKKKKGGGGGGEEVEEEEPDESMLDWWSKYFASIETMKEQLRQQEAA
AAEAEEKEDMEIAEGSKGQAKNKEKSKAPKDDKKKKQQSAPELPEKKNKQKIDELKVFNK
ELETEFDNFEDWLHTFNLLRGKIGDNDDNATEEERIVGRFKGSMCVYKVPLSDDIAKEAG
YDPSFGMFQGIPSNDPINVLVRVYIVRATDLHPADINGKADPYIAIKLGKTDIKDKENYI
SKQLNPVFGKSFDIEATFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRYYSKHRATCG
VSQTYSIHGYNTWRDPMKPSQILSKLCKEGKVDGPHFGPGGRVKVANRVFTGPTEIEDEN
GQKKQTDEHLALTVLRHWEDIPRAGCKLVPEHVETRPLLXKPGIEQGRLEMWVDMFPMDM
PAPGPATDISPRKPKKYELRVIVWNTDEVILEDDDYFTGEKSSDIFVRGWLKGQQEDKQD
TDVHYHSLTGEGNFNWRYIFPFDYLMAEEKIVISKKESMFSWDETEYKIPARLTLQVWDA
DHFSADDFLGAIELDLKRFPRGAKTSKQCSLEMVTNEAELPMVSIFKQKRVKGWWPFVAR
DENDELEITGKVEAELHLLTAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIK
YLICTRYKWLIIKIVLALLLLIMIALFLYSMPGYMVKKLLGA
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcctggctgcaatgccgagacttctttgtcttgcaaaaaaaacccccgaaag
gctgggaaaggagttttttcagccatgaagcttggcaagacgcgtccatcaaaggatgac
catcggaaacaagatgaacccgctgttttggaggcagaagacctggaccgaaaagccacg
aggcgggcgtgtggactggagccagacaccatctccttggcctctgtcacagctgtcacc
accaacgtctcaaataagaggtccaagcctgacatcaaaatggagccgagtgctgggagg
ccaatggattaccaggtcagcatcaccatcatcgaggcccggcagctggttgggctcaac
atggaccccgtggtctgcgtggaggttggagaggaaaagaaatacacatccatgaaggaa
tcgaccaattgcccttactacaatgagtacttcgtcttcgatttccacgtgccccccgat
gtcatgttcgacaagatcatcaagctgtccgtgatccactcaaaaaacctgttgcgcagt
gggaccttggtaggttccttcaagatggacgttggaactgtttatacgcagcctgagcac
cagttctaccacaagtgggccatcctttctgaccccgaagacctcaccgccgggctgaaa
ggttacctgaagtgtngagggaaaggggacaacatcaagacaccgcacaaagccaatgag
acggatgaggatgatattgaagggaacctcctcctcccggatggggtccctccggagagg
cagtgggctcgtttctacatcaagatctatcgagcagaggggctgccccgtatgaacacg
agcatcatggccaatgtgaagaaggctctcattggggagaacaaggacttggtggacccc
tacgtgcaggtggtctttgcagggcagaaggggaagacatccatacaaaaaagcagctat
gagcctctctggaatgagcaaatagtcttcacagaaatgttccctccgttgtgcaagcgg
ataaagatccagatccgagactcggacaaagtcaacgatgtggccattggtacccatttc
attgatttgcggaagatctctaacgaaggagacaaaggctttctgcccaccttcggcccc
gcgtgggtgaacatgtacggctccacccggaactacaccctgatggacgagcaccaagag
ctgaacgagggtctgggagaaggcgtctccttccgtgccaggcttttgatgagtcttgct
gtggagatcttggacaccactaacccggagatcaacagctccaccgaggtgcaagtcgag
cagaccacgtcagttgctgataactgcactgggaagatggaggagttttttctctttgga
gccttcctggaagctaccatgatcgacaggaagattggtgacaaacccatcaacttcgag
gtcacaataggtaactacgggaaccagatcgatggcacgaccaaacccaccctgcggagg
aagaaagagggaggggatggggatgaggaggagtccgagctgctccagaactcaagtgac
gatgaaggtgatgaggatggggagctggtctctgtttcttcatctcaacccatgaagccc
ctggtcacagacaggaactacttccacctgccgtactttgagaagaagccctgcatctat
atcaagagctggtggcaggaccagcgccgcagactgtataatgccaacatcatggacaag
attgcggacaagctggaggaagggctcaatgatgtgcaagaaatgatcaagacggagaaa
gcccaccctgagcgacgactccgaggggtcctggaggagctgaccagtgggtgcttgcgc
ttcgtgatgttggctgacaaggaccagcagcactcttcccgcacgaggctggaccgggag
aggctcaagtcctgcatgcgggagctggagaacatggggcagcaagccacgaccctgcgg
tcgcaggtgaagaagaacaccatgaaagacaagctgaagctggtacaaaacttcctgcag
aaactccggttcttggcggatgagcctcagcacactattcccgacgtcttcatctggatg
atgagcaacaacaagcgcattgcctacgcccgcatcccttccaaggatatcctctactcc
attgtggatgaggagatgggcaaggactgcgccaaagtgaagaccatcttcctcaagcta
cctgggaagaggggctttggacctgctggctggacagttcaggccaagatggagatgtac
ttgtggctgggcctcaacaaacagcgcaaagacttcttgagcggcctgccctgtggcttt
gaggagaagaagactgccagaggccaaaacctgccatccttcccacccatcagcctcctg
tacaccaagaagcaggttttccagctgcgagcccacatgtaccaagctaggagtttattt
gcagccgacagcagcggcctttcggacccctttgcacgagtcttcttcatctcccagagc
caatgcacagaggttctcaatgagaccctttgcccaacctgggaccagctgctggtcttc
gacaacgtggagctgtatggagaagctcatgagatgcgggatgaccctcccataattgtc
attgagatctatgaccaggacacagtgggcaaagctgacttcatgggccgcacctttgcc
aagccggtggtgaagatgtcggatgagcgctactgccccccgcgcttccccccacagctg
gagtactaccagatctaccggggcaactccacagcaggcgacttgctggctgcctttgag
ctgctccagattggccctggtggcaagacagacctgcccccgatcgacgggcccacagac
atggaccggggccccatcctgccagtgccactggggattcggccagtgctgagtaaatac
agagtggagatcctgttttgggggctgagggatctgaagagagtgaacctggcccaggtg
gaccggccccgggtggacattgagtgtgctgggaagggggtccagtcagccctcatccag
aactacaagaaaaaccccaacttcagcactttggtcaagtggttcgaagtggacctccca
gagaatgagctgctccacccacccctcaacatccgggtggtggattgccgggctttcgga
cgttacacgctggtggggtcccacgctgtcagctccctcagaaagttcatctaccgccca
ccagacaagaaagcccagcactggaatatgacagctaaacacctcaacggctatctggca
gtggccaacagggcctatcgctctcgccccacaggggagatcgttgtcaatatggaacct
gaggttcccatcaagaagatggagacgatggtgaagctggaagctaactccgatgcagtg
gtgaaggtggatgtgtctgaggaagagaaggagaaaaagaaaaagaagaagaaaggagga
ggaggaggaggagaagaagtagaagaggaggagccagacgagagcatgctggactggtgg
tccaagtattttgcttcaattgagactatgaaggagcaactccggcagcaggaagcagcc
gcagcagaagcggaggagaaggaagacatggagattgcagaggggtccaagggtcaggcg
aagaacaaggagaagtccaaggcacccaaagacgataagaaaaagaagcaacagtcagct
cctgagcttcctgagaagaagaacaagcagaagatcgacgaactgaaggtcttcaataaa
gagctggaaacagagtttgataactttgaggactggctgcacaccttcaacctgctccgt
gggaagattggggacaacgacgacaatgcaaccgaagaggagcggatcgtggggaggttc
aaaggctccatgtgcgtctacaaagtgccgctctctgatgatatcgccaaggaggcggga
tacgaccccagctttggcatgttccaggggatccccagcaacgaccccatcaacgtgctg
gtccgagtctatattgtgcgggccacggaccttcacccagctgacatcaatgggaaagct
gatccctatattgccatcaagctggggaagacggacatcaaagacaaggagaactacatc
tccaagcagctgaaccctgtctttggaaaatcctttgacatcgaggccaccttccccatg
gagtccatgctgacggtggcggtgtacgactgggacttggtggggactgacgacctcatt
ggagagaccaagattgatctggagaaccgctactacagcaagcaccgagctacttgtggg
gtgtcgcagacttactccatacatggttacaacacctggcgtgaccccatgaagccctcc
caaatcctgtccaagctgtgcaaagagggcaaggtggatgggccgcactttgggccagga
ggaagagtgaaagttgccaacagggtcttcaccggccccacggagattgaggatgaaaat
ggtcagaagaagcagacggatgaacacctggccctgactgtgctgcgccactgggaggac
atcccacgggcaggctgcaagctggttcctgagcacgtggagacgcgtccgctgctgnna
aagccaggcatcgagcagggtcgcctggagatgtgggtggacatgttccccatggacatg
cctgcgcccggccccgccactgatatttcccccaggaaaccaaagaagtatgagcttaga
gtgatagtgtggaacacagacgaggtcatcctggaggacgatgactacttcactggcgag
aaatccagtgacatttttgtcagggggtggctgaagggtcagcaggaggacaagcaagac
acggatgtccattaccactcactcaccggtgaaggcaacttcaactggcgctacatcttc
ccctttgactacctgatggcggaggagaagatcgtcatctccaagaaggagtccatgttc
tcctgggatgagaccgagtacaagatcccagctcgcctcaccctgcaggtctgggatgct
gaccacttctcggccgacgacttcctcggggccatcgagctggacctgaaacgctttccc
cggggagccaagacatcgaaacagtgcagcctggagatggtgacgaatgaggcagagctg
cccatggtctccatcttcaagcagaagcgggtgaagggctggtggccgttcgtggccaga
gatgagaatgatgagctggagatcaccgggaaggtcgaggctgaactgcaccttctgaca
gcagaggaggcagagaaatcccccgctgggctggctcgcaatgagcctgatccgctggag
aaacccaaccgcccggacacatccttcatctggttcctgaacccactcaagtccatcaaa
tacctcatctgcacacgctacaagtggctcatcatcaagattgtgctggccctgttgctc
ctcatcatgattgccctcttcctctacagcatgccaggctacatggtcaagaagctgctg
ggagcatga
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integrated database retrieval system
