Phalacrocorax carbo (great cormorant): 104053277
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Entry
104053277 CDS
T08596
Symbol
PHC1
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
pcao
Phalacrocorax carbo (great cormorant)
Pathway
pcao03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pcao00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104053277 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcao03036
]
104053277 (PHC1)
Chromosome and associated proteins [BR:
pcao03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
104053277 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
104053277
NCBI-ProteinID:
XP_009512997
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
METESEQNSSSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QLNSAQLHSLAAVQQATIAASRQASSPNTSTAQQTTTTQASINLATTSAAQLISRSQSVS
SPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLASQLILMPNG
AVAAVQQEVPPTQSPGVHADTDQVQNLAVRSQQTSATNAQLQGSAQKAALPGSSQASGLP
QATSTGQTLAVAQASSGSAGQSLNLSQGAAGNNGVSGGVVARGGSQTSTGLSQASSAGAA
GSCQRKGTGVVQPFXAAQAVTVSQGSQTETENAATKKGETDSGGQQTVGMNLTRTATPAP
SQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHHQQQFQHRQSQLLHTATHLQ
LAQQQQQQQAPSLTQQQQQAQPLQQQAPSQNQQQAQTLVVQPMLQSQPQPMQLQQDSPCQ
PATKSPVPIQSKSLVTPIKPPQLGLAKMSATQQPPPHIPVQVVGTRQQGSGQAQALGLAQ
IAAAVPTSRGMPAVVQPVSQAHAASPSSSSAPASSQEAPPLTTGVNLAQVQGTAHMVKSP
ASSPAVAQMPAAFYMQSVQLPGKSQTLAVKRKAESEEEKEESPSVTAVLPARSSPVTDSP
KNIEEKSGLGDKSDPAAVATPNTTSSEGASANPTSAPTPNLAMLSRQMGDSKPPQAIVKP
QILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQGEVPSGQSENLSSNSPGGDSASVEL
DKKANLLKCEYCGKYAPATQFRGSKRFCSMTCAKRYNVSCSHQFRLQRKKMKEFQEANYA
RVRRRGPRRSSSEIARTKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGPLSVRASHGER
DLVNSSMAPPTPDLHGINPVFLSTNPSRWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQA
LLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagcgagcagaactccagctctaccagcgggagctccagttctggagga
agcacccgtcctcagatatcacagatgtctctctatgagcgacaggcagtacaggccctg
caggcactccagagacagcctaatgcagcccagtactttcatcagtttatgctccagcag
cagcttaacagtgcccagcttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagttcccccaacaccagcaccgcgcaacagaccacaaccacccaggcc
tctatcaacctagccaccacatcagctgctcagctgatcagtcggtcacagagcgtgagc
tcccccagcgccacaaccttgacgcagtctgtactccttggaaataccacctcaccgcct
ctcaaccagtcacaggcccagatgtatctccggccacagctggggaacctgttgcaggta
aaccggaccttgggccgcaatgtgcctcttgcctcccaactcatcctgatgcccaacggg
gctgtggccgctgtccagcaggaggtaccacccactcagtctcctggggtccatgcagac
acagatcaggtgcagaatttggctgtgaggagccagcagacctcggccactaatgctcag
ctccaaggctctgctcagaaggcagctctgccaggaagctcccaggcttcaggcttacca
caggccaccagcacgggtcagaccttggcagtggctcaggcctcctctggcagcgcaggc
cagtccctcaacttgagccagggcgcagcaggcaacaatggtgtctccgggggtgtggtg
gcaaggggtgggagccaaacctcaacgggattgagccaagcctcctcggcaggtgccgct
ggcagttgccaaaggaaaggcacaggggtggttcagccgtttnttgctgcccaggccgtg
actgtcagccagggaagccagacagagacagagaatgcagctacaaagaagggtgaaaca
gacagcggtggacagcaaactgtgggcatgaacctgaccaggaccgctacaccagcgccc
agccagacattgatcagctcagccacatatacacagatccagccacactcgctgatccag
cagcagcagcagatccacctgcagaagcaggtggtgatccagcagcagatcgccattcat
caccagcagcagttccagcaccgccagtcccagctcctccacacagccacccaccttcag
ctggcccaacagcagcaacagcagcaagcaccatctctaacccaacagcagcagcaggct
caacctctgcagcagcaggctccatctcaaaaccagcagcaggctcagacccttgtggtg
caacctatgttgcagtcccagccacagcctatgcagctccagcaggacagtccttgccag
ccagccaccaagtcacctgttccaattcagtcaaaatctctggtcacccccatcaaacca
cctcagcttgggcttgccaaaatgtcagcaacacagcagcctccaccacacatcccagtg
caggtggtgggcactcggcagcagggctcaggccaagcccaagcactgggtttggctcag
attgctgcagcagtgccaacatcccggggaatgccagccgtggtccagcctgtttcccaa
gcccatgctgcttccccatcgtcatcttcagctccagcatcctcacaggaagctcctcct
ctcaccacaggggtgaatttggcacaagttcaaggcacagcccacatggtgaagagccca
gcctcctctccagctgtggctcagatgccagcagcattctacatgcagtctgtccagttg
ccaggcaagtctcagaccttagcagttaagcgcaaggcagagtcagaggaggagaaggag
gaatcacccagtgtcactgcagtcctgcctgccaggtcctctcctgtgacagacagcccc
aaaaacatagaggagaagagtggccttggagataaatctgatcctgctgccgttgcaacc
ccaaataccacctcaagtgaaggagcatcagccaaccccacctctgctcccaccccaaac
ctggcaatgttgtcacgtcagatgggagactccaaacccccacaagccatcgtcaagccc
cagatcctcacacacatcattgagggctttgtcatccaggaaggagcagagccctttcca
gtgggttgttctcagttgctgaaagaatctgagaaaccactgcagggagaggttccctct
ggccagagcgaaaacctgtccagcaattctccaggaggggacagtgcttctgtggagctt
gataagaaggcaaacttgctgaagtgtgaatactgtgggaagtatgccccagcaacccag
ttccgtggctccaagaggttttgttccatgacttgtgctaaaaggtacaatgtcagctgc
agccatcagtttcggctgcagagaaagaagatgaaggaattccaggaagctaactatgct
cgtgtgcgccgacggggaccacggcgcagcagctctgaaattgctcgaacaaagatccag
ggcaagcgccacaggggccaggaagactcaagtcgaggctctgataactccagctatgat
gaagctttgtcccctacatctccaggacccctgtcagtaagggccagtcatggagagagg
gacctggtgaactctagtatggccccacctaccccagatctacatggcatcaacccagtc
ttcctgtctaccaatcccagtcgttggagtgtggaggaagtgtatgagttcattgcatca
ctgcaagggtgccaggagattgccgaggagtttcggtcacaggaaattgatggccaggcc
ctgttgcttctgaaggaggaacacctcatgagtgctatgaacatcaagctgggaccagct
ctcaagatctgtgccaagatcaatgtcctcaaggagacctaa
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