Pseudoalteromonas carrageenovora: PC2016_0579
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Entry
PC2016_0579 CDS
T06565
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar00300
Lysine biosynthesis
pcar00550
Peptidoglycan biosynthesis
pcar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PC2016_0579
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PC2016_0579
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcar01011
]
PC2016_0579
Enzymes [BR:
pcar01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PC2016_0579
Peptidoglycan biosynthesis and degradation proteins [BR:
pcar01011
]
Precursor biosynthesis
Amino acid ligase
PC2016_0579
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
WDR90_beta-prop_4th
Gly_reductase
Motif
Other DBs
NCBI-ProteinID:
QBJ70822
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All DBs
Position
I:644533..646011
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AA seq
492 aa
AA seq
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MRDLKAILKYIDIDAPSQVVKHLRLDSRDVTPGDVFVAIKGHQLDGGQFIDKAIENGATA
IIADRLCEFDVSFEPLYLVTELDKKLPELASRFYAQPSHNLDLIGVTGTNGKSTTTAMIA
HLAQFCSIDSAIIGTLGYGHPDTLTPLINTTPSTVDLQHILSDLHQQHKKLIAMEVSSHG
LVQHRVAQCQFKAAVFTNLSRDHLDYHGDMVSYGDAKLMLFRDFEPQHVVLNQDDGQAEQ
WLEKYSFNNLVCYGRKNLAPDNVKFVYFSDVEYSNNGISAQLITSWGDVKIKSPLFGEFN
LYNLTAALATLLSLGYPLEQLIDGCAHLQPVAGRMQAFSEADKPTCVVDYAHTPEALALA
LQALQKHVPGGVSCVFGCGGDRDKGKRALMAQAAEQNANKVIITSDNPRSENPDAIIADV
AAGLTHPEKAHLEADRATAISYAINNAAAGDVILIAGKGHEDYQIIGDTRIDFCDRRYVQ
EQLKKAVRGITQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatttaaaggctattttaaaatacatcgatatagatgcaccttcgcaggtagtt
aaacatttacgactcgatagccgtgatgttacacccggagatgtgtttgttgctataaaa
ggtcatcaattagatggcgggcagtttattgataaagcaattgagaacggcgctacagct
attattgcagatagattatgtgaatttgatgtaagctttgaacctctttatttagtaaca
gagctagataaaaaattgcctgagctggcaagtcgtttttatgcccaaccgagtcataat
ttagatttgattggtgtaacgggcactaacggcaaatcaaccacaacagcaatgattgct
catttagcgcaattttgtagtatagattcggccattattggcacgctagggtatggtcac
ccagacacactcacgccacttattaataccacgccttcgactgttgatttacaacatata
ttgagtgatttgcaccaacagcataaaaaactaattgctatggaagtatcatcgcacggt
ttagtgcagcaccgtgtagcacagtgccaatttaaagcggcggtatttactaatttatcg
cgtgatcacttagattatcatggtgatatggtaagttatggggatgcaaagctaatgctg
tttcgcgattttgaaccacagcatgtagtgctcaatcaagatgacggacaagcagagcag
tggttagaaaaatacagctttaataacttagtttgttatgggcgtaaaaatttagcccct
gataatgtgaaatttgtgtatttttctgacgttgaatattctaacaatggtatttcggcg
caattaatcacaagttggggtgacgttaagataaaatcgccgctgtttggcgaatttaat
ttgtataatttaactgctgcactcgctacattacttagcttaggttatccgctggagcaa
cttattgatggttgcgcacatttacaacctgttgcagggcgtatgcaagcatttagcgaa
gcagacaagccaacatgtgttgttgattatgcacatacacctgaggcgttagcacttgca
ttacaagcgctgcaaaaacatgtgccaggcggtgtaagctgtgtatttggctgtggtggc
gatagagataaaggcaagcgtgctctaatggcgcaagctgctgagcaaaatgctaataag
gttattattactagcgataacccacgctcagaaaacccagacgccattattgcagatgta
gcagcaggtttaacgcatcctgaaaaggcccatttagaggccgaccgagcaaccgcaatt
agttatgcaataaataatgccgcagccggcgacgttattttaattgctggtaaagggcat
gaagattatcaaataattggcgatacgcgcatagacttttgcgatcgccgctatgtacaa
gaacaactaaaaaaagcagtaagagggataactcaatga
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