Pseudoalteromonas carrageenovora: PC2016_2454
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Entry
PC2016_2454 CDS
T06565
Name
(GenBank) multidrug efflux pump
KO
K18138
multidrug efflux pump
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar01501
beta-Lactam resistance
pcar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PC2016_2454
01503 Cationic antimicrobial peptide (CAMP) resistance
PC2016_2454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_2454
01504 Antimicrobial resistance genes [BR:
pcar01504
]
PC2016_2454
Transporters [BR:
pcar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PC2016_2454
Antimicrobial resistance genes [BR:
pcar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PC2016_2454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QBJ72645
LinkDB
All DBs
Position
I:2808614..2811712
Genome browser
AA seq
1032 aa
AA seq
DB search
MKITDTSVKRPVFAIVINLLLLTFGLVAFTMLPLREYPDIETPIVNISTEYTGASAEIIE
TKITQIIENRISGIEGIKSINSSSRNGRSNITIEFNINRDIDAASNDVRERVARALDSLP
DQVRPPEISKSNSDESPIAWFVLNSETMDSLQLSDYAQRFIVDRLAVVDGVSNVRIGGER
QYAMKIWLNRQAMAARGITSSDIENTLRTENVELPAGEIESIDRDFTVRTARSYKDQRDF
KNLVIKRGEEGYLVRLGEVADVQLEAADDESLFRGNGRNMIGLGIVKQAKANTLTVVDNA
RSELEKIKRNLPEGTTIQDSYDSSVFIKESISEVYSTLAISMGLVVLVIFLFLGNIRATL
IPAVTVPVALVGSFMFLLAMGYSINLLTLLALVLAIGLVVDDAIVMLENIHRRIELGEPP
LLAAFRGAREVGFAIVATTLVLISVFVPLVFMDGRIGALFTEFAMAVSAAVFFSSVTALT
LAPALCSKVLKVSDKPNKFSLWMDRQFTKIESSYRKSLSTNITRKWGLMVSLLLAGFVSY
SLFLQVPSELTPKEDRGTFFIMMSGPEGASYENNAANMAKIEERLMPYSQAGELSRVLVR
VPGWGGSGGVAIVGMADWDKRKRSTWEVMDEISGKMQEVTDVRAFAIMRRGIGGGGSSRP
IEFVLQGNDYAQLADWRDRIIKRAEQNPGLVRIDHDYKETFPQFLVSIDKNKAADLGVSV
SDVGTTLETMLGQRRVTTFIDRGEEYDVILKGTKADFANPTDISNIYLKSRSGELVPLDS
LISLKEEATASRLNRYNRMRAITLSANLADGYTLEQALNFLNEVAAQENDIDGAVDYKGE
SQLYYEGASAMTYVFILALTVTFLVLAAQFESFMHPFVIMLTVPLGLMGAMFGLWSTGLT
LNIYSQIGIVMLIGLSAKNGILIVEFTNQLRDKGVEFSEAILQAATQRLRPIIMTSLTTV
MSSVPLVLASGPGAESRMVIGVVVFTGVIVSTLLTLFVVPAAYYALARNTQSPEFLQQKL
DKQAQDKPLEEI
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattacagatactagcgttaaacgccctgtttttgccattgtaattaatttacta
ctgcttacttttggtttggttgcttttactatgctgccacttcgagaatacccagatatt
gaaacgcctatagtaaatataagtactgagtacactggcgcgtctgctgagattatagaa
accaaaataacgcaaataattgaaaatcgtatatcaggtattgaaggtattaaaagtatt
aactcatcaagtcgtaatggacgttcaaacattactattgagtttaatattaaccgcgac
atagacgctgcatctaacgatgtacgagagcgagttgctcgcgctctagatagcttacct
gatcaagtacgcccacctgaaatatctaaatcaaatagtgatgaaagccctattgcgtgg
tttgtactaaacagcgaaacaatggattcgttgcaactatctgattacgctcagcgtttt
attgttgaccgtttggccgtcgttgatggtgtatcaaacgtacgtattggcggagagcgc
caatacgcgatgaaaatttggctaaatcgccaagccatggctgcccgtggaattacatca
agtgatatagaaaatacgctacgtacagaaaacgttgagctaccagcgggtgaaattgag
tcgatagatcgtgactttactgtacgtacagcccgaagctataaagatcaacgcgatttt
aaaaacctagtaataaagcgtggtgaagaaggctatttagtacgtttaggtgaagttgcc
gacgttcagctagaagctgctgacgatgaaagtttgttccgtggtaatggccgtaacatg
attggtttaggcattgttaagcaagctaaagcaaacacgttaaccgtggtagacaatgcc
cgcagcgaacttgaaaaaataaaacgaaacctacctgaaggtactactattcaagacagc
tacgactcctctgtgtttattaaagagtcaattagtgaagtttacagcactctagcaata
tctatggggctagttgtactggttatatttttgtttttaggcaatatacgagcaacgctt
atcccggcagtaactgtacccgtagcactggttggtagctttatgtttttacttgctatg
ggttactcaatcaacctattaacgttattggcattagtattggctattggtttagtcgta
gatgacgccattgtaatgcttgaaaacattcaccgccgtatagagctgggtgagccaccg
ttgttagccgcatttaggggcgcacgtgaagtaggttttgcaattgtagcaaccacacta
gtgcttatatcggtatttgtgccgcttgtatttatggatggccgtataggcgccttattt
acagagtttgcaatggctgtaagtgctgccgtatttttctcaagcgttaccgcgctaacg
cttgctcctgccctttgctctaaagtacttaaagtatctgacaaaccaaacaagtttagc
ctgtggatggaccgtcagtttactaaaatagaatcaagctatcgtaagtccttatctacc
aatataacccgtaaatggggattaatggtgagcttattacttgctggctttgttagttat
tcgctatttttacaagtcccctctgagctaacgccaaaagaagaccgtggtacattcttt
attatgatgagtggtccagaaggcgcaagctacgaaaataatgccgccaacatggcaaaa
attgaagagcgcttaatgccctattcgcaagcaggtgagcttagccgtgtgcttgttcga
gtgcctggttggggcggtagcggcggcgtggcaattgtaggtatggccgattgggataag
cgtaaacgctctacgtgggaagtaatggatgaaataagcggtaaaatgcaagaagttacc
gatgtacgtgcctttgccattatgcgccgcggtattggcggtggtggctcatctcgccct
attgagtttgtattgcaaggtaacgattacgcacaactagccgattggcgcgaccgcata
ataaaacgtgccgagcaaaacccaggccttgtaagaatcgaccatgattataaagaaacc
ttcccacagtttttagttagcatagataaaaacaaagcggctgatttaggtgtgtcggta
tcagatgtgggcacaactcttgaaacaatgttgggtcagcgccgcgtaactacctttatt
gaccgtggtgaagagtacgatgtaattttaaaaggtacaaaagccgattttgctaaccct
actgatatttcaaacatataccttaaatcgcgaagcggtgagctagtaccgctagacagc
cttatcagcttaaaagaagaagccacagcatcgcgattaaatcgttataatcgtatgcgc
gctataacgctaagcgctaacttagctgatggctatacgcttgagcaagcgcttaacttt
ttgaatgaagtagccgcgcaggaaaacgatattgatggtgctgtagattataaaggcgaa
tctcagctttattacgaaggtgcatctgcgatgacctatgtatttatacttgctcttacg
gttacttttttagtactggcagcgcaatttgaaagctttatgcacccgtttgtaattatg
ctaactgtaccgcttggcttaatgggcgctatgtttggtttatggtctactggccttacg
ctcaatatttacagccaaattggtattgtcatgctcataggtttaagcgctaaaaacggt
attttaatcgttgagtttactaaccagctacgtgataaaggcgttgaatttagcgaagct
attttgcaggcagcaactcagcgcttacgccctattattatgacctcgctgaccacggtt
atgagttcggtacctttagtacttgcctcaggtcctggtgctgaaagccgcatggtaatt
ggtgttgttgtatttacaggcgttatagtctctaccttgctgacgctttttgttgtacct
gctgcgtattatgcgttagctcgaaacacacaatcgcctgagtttttacaacaaaaactt
gataaacaagcacaagataaacctttagaagagatctaa
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