Pseudoalteromonas carrageenovora: PC2016_3430
Help
Entry
PC2016_3430 CDS
T06565
Name
(GenBank) MexE family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar01501
beta-Lactam resistance
pcar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PC2016_3430
01503 Cationic antimicrobial peptide (CAMP) resistance
PC2016_3430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcar03036
]
PC2016_3430
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_3430
01504 Antimicrobial resistance genes [BR:
pcar01504
]
PC2016_3430
Chromosome and associated proteins [BR:
pcar03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
PC2016_3430
Transporters [BR:
pcar02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
PC2016_3430
Antimicrobial resistance genes [BR:
pcar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PC2016_3430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
HH_EMRA
BSH_CzcB
YknX_C
HH_YBHG
HH_AAEA_pHBA
AAL_decarboxy
BSH_YknX
L27_N
Motif
Other DBs
NCBI-ProteinID:
QBJ73605
LinkDB
All DBs
Position
II:complement(295292..296461)
Genome browser
AA seq
389 aa
AA seq
DB search
MQRSRIALFVLSALVGSVALTGCDKAADQSQASAPQAVPVGVITLKSQALTLKKELPGRI
SAFQIAEIRPQVSGIVQSRLFEEGKEVKKGQALYQIDPATFEADLAASEAAVARAEASIA
SSKSKASRYSELLKIKAVSQQDFDEADAASKQANAELLTAKAQLKSAQINLDYSHVSSPI
SGQISKSSVTVGALVSANQSTALATVTQLDPIYIDLTQSSNELTQLKKALASGNLGIDAQ
SQTDVELTMEDGSAYSHKGTLQFSEVTVDPSTGSVTLRAKFPNPEKLLLPGMYARASVVE
GVKANAILVPQRGVSRNNKGEPTAMVVGKDNKVESRVLKVDRTIGSNWLVSDGLSDGDKL
IVEGLQKIRPGAQVTPSEVQSSTSANNAQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcccgcatcgctttatttgtattatcagccctcgttggttctgttgcttta
actggttgtgataaagcggctgatcagtcacaagcatcagcgcctcaagctgttccagtg
ggtgtaattacattaaaaagccaagcgcttactctcaaaaaagagcttcctggtcgtatt
agcgcatttcaaattgctgaaattcgtccgcaagtaagcggtattgtgcaatctcgatta
ttcgaagaaggtaaggaggttaaaaaaggtcaagctctttatcaaattgaccctgctact
tttgaagcagacctagccgcaagtgaagccgccgttgctcgtgcggaggcaagtattgcg
agctctaaatcaaaagcgtctcgttacagcgaactattaaaaattaaagccgtaagccag
caagactttgacgaagctgatgcagcgtctaaacaagcaaacgctgaattgttaacggct
aaagcacaattaaagtcagcgcaaatcaaccttgattacagccatgtatcttctcctatt
agtggccaaattagtaaatcaagcgtaacagtaggtgcattagtaagtgctaatcaaagc
actgcacttgcaacagtgactcaattagacccaatttatattgatttaacccaatccagc
aacgagcttactcagcttaaaaaagcactcgcttcgggtaatttagggattgatgctcaa
agccaaactgacgttgaattaactatggaagatggctctgcatactctcacaaaggaacg
ttgcagttctctgaggttaccgttgacccaagcacgggctctgtcacgttgcgtgctaaa
ttccctaaccctgaaaaacttttattaccgggtatgtatgcacgtgcctctgtggttgag
ggtgttaaagccaatgctattttagttcctcagcgtggtgtaagccgaaataataaaggc
gagccaacagctatggtggtaggcaaagacaataaagtagaaagtcgcgtattaaaagta
gatagaaccattggctctaattggcttgtaagtgacggtttaagcgatggcgataaatta
attgtagaaggtttacaaaaaattcgtccaggagcgcaagttacgccttctgaagtgcaa
tcgtctactagcgccaacaacgcgcaataa
DBGET
integrated database retrieval system
