Pseudomonas alvandae B21-020: LOY40_05040
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Entry
LOY40_05040 CDS
T08625
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00300
Lysine biosynthesis
pcas00550
Peptidoglycan biosynthesis
pcas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LOY40_05040
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LOY40_05040
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
LOY40_05040
Enzymes [BR:
pcas01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
LOY40_05040
Peptidoglycan biosynthesis and degradation proteins [BR:
pcas01011
]
Precursor biosynthesis
Amino acid ligase
LOY40_05040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UVM73540
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Position
1146095..1147558
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGHDLLIRELALDSRDVRAGDLFLAVPGARFDGRDHIADALKRGAAAVA
YEVNGATVLPITDVPLIPVKGLAAQLSDIAGRFYGEPSRHLNLIGVTGTNGKTSVTQLVA
QALDLLGQHCGIVGTLGNGFHGALQSGLHTTPNPIAVQATLADLKKAGAKAVAMEVSSHG
LDQGRVTALAFDVAVLTNLSRDHLDYHGTMQAYGEAKARLFAWNNLKCRVINIDDEFGRQ
LAAEQRESRLITYSLEDASAYLYVRQAQFDDEGVRATLVTPQGEHHLRSTLLGRFNLSNV
LAAVGALLGLDYALDEILKVLPKLEGPAGRMQRLGGGTQPLVVVDYAHTPDALEKVLTAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRSEDPLRIFDDIRAGF
SAVDNVTFVAGRGQAIAQLIASASANDVIVLAGKGHEDYQEINGERHAFSDLVEADHALT
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgagcctgaacaagatttttgcccacgccggtcatgacctgctgattcgcgag
ctggccctcgacagccgtgacgtgcgcgccggtgacctgttcctggccgtgccgggagcc
cgtttcgatggccgcgaccacattgccgacgcgttgaaacgcggagcggccgccgtggcc
tatgaagtgaacggcgcaaccgtgctgccgatcaccgacgtcccgctgatcccggtcaag
gggctggcggcgcagttgtcggatattgccggacgcttttatggcgagccgagccgtcac
ctgaacctgattggggtgaccggcaccaacggcaagaccagcgtgacccaactggtggcg
caggcgctggatctgctcgggcagcattgcggcatcgtcgggaccctgggcaacggattc
catggcgccctgcaaagcgggctgcacaccacgccgaatccaatcgccgtgcaagcgacc
ctggcagacctgaagaaggccggggccaaggccgtcgcgatggaagtctcttcccacggt
ctcgatcaaggccgggtcaccgcgctggccttcgatgtagcggtgctgaccaacctgtcc
cgcgatcacctggattaccacggcacgatgcaggcctacggcgaggccaaggcccggctg
ttcgcctggaacaacctgaagtgccgggtcatcaatatcgatgacgagttcggtcggcaa
ctggccgccgagcagcgcgagtcccggttgatcacctacagcctggaagacgccagtgcc
tacctttatgtacgccaggcacagttcgatgacgaaggcgtgcgcgccacgctggttacc
cctcagggtgaacaccatttgcgcagcaccctgttgggtcgcttcaatctgagcaacgta
ttggccgccgtcggcgccttgctcgggttggactacgcgctggatgaaattctcaaggtc
ttgccgaagcttgaaggcccggccgggcgcatgcagcgcttgggcggtggcacccagccg
ctggtggtggtcgattacgcccacacccctgacgcattggaaaaagtccttacggcgttg
cgccctcacgccaagggtcggttgctgtgcctgttcggctgtggcggtgatcgtgaccgt
ggcaagcgtccgttgatggctgaggtcgtagagcggctggccgatggtgtcctcgtcact
gacgacaacccgcgcagcgaagacccgttgcggattttcgacgatatccgtgccggtttc
tcggcggtggataacgtcaccttcgtggccggacgcggccaggccattgcccaattgatc
gccagtgcgtcggcgaatgacgtcattgtcctggccggcaaagggcacgaggactaccag
gaaatcaacggtgagcgccacgcgttttccgatctggtggaagccgatcacgcgctgacc
gcatgggaggtggcccatgcttaa
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