Pseudomonas alvandae B21-020: LOY40_16070
Help
Entry
LOY40_16070 CDS
T08625
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas01501
beta-Lactam resistance
pcas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_16070
01503 Cationic antimicrobial peptide (CAMP) resistance
LOY40_16070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_16070
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_16070
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_16070
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LOY40_16070
Transporters [BR:
pcas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LOY40_16070
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOY40_16070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
UVM70134
LinkDB
All DBs
Position
3610123..3611292
Genome browser
AA seq
389 aa
AA seq
DB search
MSKKPAVTLGLLIGALLLSGCDDTSTSEESAPLASVRIETVQARPLSISNELSGRIAAPR
VAEVRARVAGVVLQRVYREGSDVKQGQVLFRIDPAPFKADLDGAEAALRKAEANAFQARL
QAQRYAQLIDDQAISGQDYDNARAYVRQTAADVAANKAAVERAKLNLGYATVTAPISGRI
GRALVTEGALVGQNETTPLALIQQLDPIHADLTQSTRELNDLRRAFRAGQLQAVGRGQAK
ATLIQDDGSPYPLPGKLLFTDLSVDPGTGQISLRSEFPNPDLDLLPGSFIRVRLEQAVNS
QGITVPQRAILRDSAGIAQVLLLDAEQKVSQQPVQLGAAQNDRWIVTEGLKPGDRIVVEG
VQHARPGEKVRIDDSPLPLAQASGPQAGH
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagaaacctgccgtcacgctgggcctgttgatcggtgcgctgttgctcagcggc
tgtgatgacacttcgacctcggaagaatccgcgccgctggccagcgtgcgtatcgagacc
gtccaggctcgaccgctgtccatcagcaacgaactgagcggtcgaatcgccgcaccgcga
gtggccgaagtccgcgcccgggtcgccggcgtggtcttgcagcgggtctaccgcgaaggc
agcgacgtcaagcagggacaggtgttgtttcgcatcgatccggcgccgttcaaggctgac
ctggacggtgccgaggcagcgttgcgcaaggccgaggccaatgcgttccaggcccggttg
caggcgcagcgctatgcccaactgatcgatgaccaggccatcagcggccaggactacgac
aatgcccgggcctacgtgcgccagaccgcagccgatgtcgccgccaacaaggccgccgtg
gaacgggccaagctgaacctcggctacgccacggtgaccgcgccgatttccgggcgcatc
gggcgcgccctggtgaccgaaggcgcactggtggggcagaacgaaaccacgccattggca
ctcatccagcaactggacccgatccacgccgaccttacccaatcgactcgtgaactcaat
gacctgcgccgcgcctttcgcgccggccagttgcaagcggtcggccggggccaggccaag
gccaccctgatccaggacgacggcagcccctatccgctgcccggcaagttgctcttcacc
gacctcagcgtcgaccctggcactggccagatcagcctgcgcagcgagttccccaacccg
gacctggacttgctgccgggcagtttcatccgggtgcgcctggagcaggcagtgaacagc
caaggcatcaccgtgccgcaacgggcgatcctgcgcgacagcgccggcatcgcccaggtt
ttgctgctggacgccgagcagaaggtcagccagcaaccggtgcaattgggcgccgctcag
aatgatcgctggatcgtcaccgaaggcttgaagccgggcgatcgcatcgtcgtcgaaggt
gtccagcacgcacgccccggtgaaaaagtccggatcgatgattcccctcttcctctcgcc
caggcttccgggccacaggcaggacactaa
DBGET
integrated database retrieval system
