Pseudomonas alvandae B21-020: LOY40_16075
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Entry
LOY40_16075 CDS
T08625
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas01501
beta-Lactam resistance
pcas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_16075
01503 Cationic antimicrobial peptide (CAMP) resistance
LOY40_16075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_16075
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_16075
Transporters [BR:
pcas02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LOY40_16075
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOY40_16075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
ParB_C
VirD1
Motif
Other DBs
NCBI-ProteinID:
UVM70135
LinkDB
All DBs
Position
3611296..3614391
Genome browser
AA seq
1031 aa
AA seq
DB search
MPQFFIDRPVFAWVVALFILLAGILAIPQLPVAQYPVVAPPQIEIYAVYPGASAQTIDES
VVSLIEEELNGADNLLYFESQSSLGSATITATFQPGTNPELAQVDVQNRLKAVESRLPQA
VTQQGLQVDKVSAGFLLLITLTSSDGKLDDVALSDYLARNVMNEIKRLDGVGKAQLYGAE
RAMRIWIDPRKLVGFNLTPADVNAAIVAQNAQVSAGSLGDLPSRSTQEITATIVVKGQLS
TPQEFADIVLKANPDGSTVRIADVARVEIGSQEYQFSTRLNGKPSTAVAVQLSPGANALN
TATLVRAKMDELARYFPAGVEYKIPYDTSPFVRVSITKVVYTLGEAMLLVFAVMFLFLQN
IRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
QEGLSPKEATRKAMGQITGAIIGITLVLVAVFIPMAFMQGSVGVIYQQFSLSMATSILFS
AFLALTLTPALCATLLKPIAPGDHHAKRGFFGAFNRGFDRFGDRYHGWVAYAVRRSGRYL
LIYGVLLVGMGLLFSRLPSSFLPVEDQGYTITDIQLPPGASKNRTVQVVEQIEAHNAGEP
GVGDSTVILGFSFSGSGQNAALAFTTLKDWSQRGGDDSAASIADRANQAFGAIKDAMVFS
VLPPPVDGLGTSSGFEFRLQDRGGLGHATLMQARSELLAAAEKSPVLMNVRESALAEAPQ
VQLEVDRKQANALGISFADVGGVLSTAVGSAYINDFPNQGRMQRVVVQAEGDQRSQVEDL
LKIHVRNSNGQMVPLSAFVQARWTQGPAQLTRYNGYPAVSISGEPAPGYSTGQAMAEIER
LVAQGPKGMGQEWTGLSLQERLSGSQAPILLGLSLLVVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVSLRGMPNDVFFKIGLITIIGLSAKNAILIIEFAKSLYDEGHDLVDATLQA
ARLRLRPIIMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMISATLAVVFVPVFFVV
VMKRVTRRKSD
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaattcttcatcgaccgcccggtgtttgcctgggtcgtcgcgctgttcatcctc
ctggccgggatcctggccattccacaactgccggtggcgcaatacccggtcgtggcgccg
ccgcaaatcgagatctacgcggtgtacccgggcgcgtcggcgcagaccatcgacgagagc
gtggtcagcctgatcgaggaagaactcaacggcgccgacaacctgctgtatttcgaatcc
cagagcagcctcggcagcgccacaatcaccgcgaccttccaacccgggaccaaccccgaa
ctggcccaggtcgacgtgcagaaccgcctcaaggcggtggagtcgcgcctgccgcaagcg
gtaacccagcagggcttgcaggtggacaaggtttccgccggtttcctgttgctgatcacc
ctcacctccagcgacggcaagctcgatgacgtggcgctcagcgattatctggcgcgcaac
gtgatgaacgagatcaagcgcctggacggcgtcggcaaggcccagttgtacggcgccgag
cgggccatgcggatctggatcgatccgcgcaagctggtgggtttcaacctgaccccggcg
gacgtcaatgccgccatcgtcgcgcagaacgcccaggtctcggccggcagcctcggcgac
ctgccgagccgcagcacccaggaaatcaccgcgaccatcgtcgtcaagggccagctctcg
acgccgcaggaattcgccgacattgtgctcaaggccaaccccgacggttcgacggtgcgc
atcgccgatgtcgcgcgggtggaaatcggcagccaggaataccagttctccacgcgcctg
aacggcaagccgtcgactgccgtggcggtgcagttgtcgccaggcgccaatgcgttgaac
accgccaccctcgtacgggcgaagatggatgagctggcgcgctacttcccggccggcgtg
gaatacaagattccctacgacacgtcgccgttcgtcagagtctcgatcaccaaggtggtc
tataccctcggcgaggcgatgttgctggtgttcgcggtgatgttcctgttcctgcagaac
atccgctacacgctgatcccgacgctggtagtgccggtggcgctgatgggcaccttcgcg
acgatgctcgccctgggtttctcgatcaacgtattgaccatgttcggcatggtgctggcc
atcggcatcctggtggacgatgccatcgtggtggtggagaacgtcgagcggatcatggcc
caggaaggcttgtcgcccaaggaggccacgcgcaaggccatgggccagatcaccggggca
atcatcggcattaccctggtactggtggcggtgttcattccgatggcgttcatgcagggc
tcggtgggggtgatctaccagcagttttcgctatcgatggcgacgtcgatcctgttttcg
gcgtttctcgccctgaccttgaccccggcgctgtgcgcgaccctgctcaagccgatcgcg
ccaggcgatcaccacgccaaacgcgggttcttcggtgcgttcaaccgcggcttcgatcga
ttcggcgaccgctaccacggttgggtggcctacgcagtgagacgcagcggccgttatctg
ttgatctacggcgtgctgctggtgggcatgggcctgctgttcagtcgcctgccctcctcg
ttcctgccggtggaagaccagggctacaccatcaccgacatccagttgccgccgggcgcg
agcaagaaccgcacggtacaggtcgtcgaacagatcgaggcgcacaatgccggcgagcct
ggcgttggcgacagcacggtgatcctcggcttcagcttctccggcagcgggcagaacgcg
gccctggcgttcaccacgctgaaggattggtcgcagcgcggcggcgatgattcggcggcg
tccatcgccgatcgcgccaaccaggccttcggcgcgatcaaggacgccatggtgttctcg
gtgctgccgccgccggtggacggcctcggtacttccagcggtttcgagtttcgcttgcag
gaccgcggcggcctcggccatgccacgctgatgcaggcccgcagcgaactgctcgccgcc
gccgaaaaaagcccggtgctgatgaacgtgcgcgaaagtgccctggcggaagcgccgcag
gtgcaactggaggtcgatcgcaagcaggcgaatgccttggggatttcctttgccgatgtc
ggcggcgtgctgtccacggcggtgggctcggcctacatcaacgacttcccgaaccagggg
cgcatgcagcgcgtggtggtccaggccgaaggcgaccagcgcagccaggtggaggatctg
ctgaagatccacgtgcgcaacagcaatggacaaatggtgccgctgtcggcgttcgtccag
gcccgctggacccaggggccggcgcaactgacccgctacaacggttacccggcggtgagc
atttccggcgagccggcaccgggctacagcaccgggcaagccatggccgaaatcgaacgg
ttggtcgcccagggaccaaaaggcatgggccaggaatggaccggcctgtcgttgcaggaa
cgcttgtccggcagccaggcgcccatcctgctgggcctgtcgctgctggtggtgttcctg
tgcctggcggcgctgtacgagagttggtcgatcccgacctcggtgttgctggtggtcccg
ctgggcgtgcttggtgcggtattggcggtgtcgttgcgcggcatgcccaacgatgtgttc
ttcaagatcgggctgattaccatcatcggcctgtcggcgaaaaacgcgatcctgatcatc
gaattcgccaagagcctgtacgacgaaggccacgacctggtcgacgccacgctccaggcc
gcgcgcctgcgcttgcggccgatcatcatgacctcgttggcgttcatcctcggcgtggtc
ccgctggcgatcgccacgggggccagctcggcgagccagcaagccattggcaccggcgtg
atcggcggcatgatcagcgccaccctggcggtggtgtttgtcccggtgttcttcgtggtg
gtgatgaagcgcgtcacgcgtcgcaaatccgattga
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