Pseudomonas alvandae B21-020: LOY40_16550
Help
Entry
LOY40_16550 CDS
T08625
Symbol
metC
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00270
Cysteine and methionine metabolism
pcas00450
Selenocompound metabolism
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01230
Biosynthesis of amino acids
Module
pcas_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LOY40_16550 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LOY40_16550 (metC)
Enzymes [BR:
pcas01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
LOY40_16550 (metC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Rhodanese
Aminotran_1_2
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UVM70224
LinkDB
All DBs
Position
complement(3718289..3721036)
Genome browser
AA seq
915 aa
AA seq
DB search
MSQIVTPQQLQQWLFDGQEIALFDVREHGQYGEAHLFFAVNLPYSRLELDARRLAPNPKV
RLVIHDQDGTDLAARAAQRLRALDYVNVHILEGGAEGWQAAGYQLFAGVHVPSKAFGEQV
EAVRHTPHVTARQLAQWQAEGEPLVILDGRPLEEYRKMTIPGSICCPNGELGYRVHDLVP
DEQTPIVVNCAGRTRSIIGAQTLIDLGLKNPVYALENGTQGWDLANLQLEHGSERRYADE
VSRSALPGQRLAAARLAARAGVPVVGAAQVEQWTADAGRSLFLCDVRTAEEFAAGTLPGA
QHTPGGQLIQSTDLYVGVRQARVVLFDNDGVRAPIIASWLRQLGHQAFVLSGGLGSGVAL
PVPADVAPQELPLISVRALADALKDDAVALIDLRSSRAYRHGHIAGARWSIRPLLSRALA
GEQRPLVLVADDPRLAALAALELPQAEVRLLEGGPDAWRAAGLALGEGVDTLPDAQCIDF
LFFTHDRHAGNKDAARQYLAWEIGLLAQMSAEEIASLKPLHEPVQGAVGERLRTRLIHGA
RTEKGSGARTVNVPVSRLSTVLFDNLAQMRDARSRRDSERVLTYGARGNPTAFALEDLVT
ELEGGYRARLFGTGLAAVAQTFLAYLRPGDHVLITDAVYAPVRRVARDFLEAFGVAVEYF
APDGCDLPGRLRANTKMVYTEVPGSLLYELCDLPAIAALCKSRGILLAVDNTWGSGVLYR
PLALGADISIMALTKYLGGHSDVVMGSVCTRQEAWPVLAAMSDTFGNTVSPDDAYLVLRG
ARTLAPRLETHERQALEIARWLQAQPQVKRVFHPALPEHPGHRLWQRDFKGSNGLLSFEL
REKDDAYLERFIDALQVFGLGASWGGFESLVTVADTQDRNSTEDRALNPVVRLHVGLEDV
GVLIEDLQRGFIAAG
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcgtaaccccccagcaactgcagcagtggctgttcgacgggcaggaaatc
gccctgtttgatgtgcgcgagcacggccagtatggcgaagcccatctgtttttcgcggtg
aacctgccctatagccgcctggagctggacgctcggcggctggcacccaaccccaaggtc
cggttggtgattcacgaccaggatggcacagacctcgcagcgcgcgcggcgcaacgcctg
cgggctttggattacgtgaatgtgcacatcctggagggcggcgccgaaggttggcaggct
gcgggctatcagctgttcgccggtgtgcatgtgccctccaaggcgtttggcgagcaggtg
gaggcggtgcgtcacacccctcacgtcactgcccgtcaactggcgcaatggcaagccgag
ggtgaaccgctggtgatcctcgacggccgaccgctggaggagtatcgcaagatgaccatt
cccggttcgatctgttgcccgaatggtgaattgggctatcgcgtgcacgacttggtaccg
gacgagcaaacccccatcgtggtcaattgcgccggtcggacccgcagcatcatcggtgcc
cagacgctgatcgacctgggtttgaaaaacccggtctatgccctggagaacggtacgcaa
ggctgggacctggcaaatctccagctggaacacggcagcgagcgtcgatatgccgatgag
gtgtcacgcagcgcgttgccaggccagcgcttggcggcggcacgactggccgcgcgggct
ggagtgcctgtcgtcggggctgcccaggtcgagcagtggacagcggacgccgggcgcagc
cttttcctctgcgatgtgcgcaccgccgaagagtttgccgccggcacgctgccgggtgcg
caacacacaccgggcgggcagttgatccaatccaccgatctgtatgtgggggtgcgccag
gcgcgcgtggtgctgttcgacaacgacggcgtgcgtgcaccgatcatcgccagttggctg
cggcaactggggcaccaggcttttgtattgtcgggcgggttgggcagtggcgtggcatta
ccggttccagccgatgtggcgccgcaggaactgccgctgatcagcgtgcgagccttggcc
gatgccctgaaggatgacgcggtggccttgatcgacctgcgttcgagtcgggcgtatcgc
cacgggcatattgccggggcgcgctggtcgatccggccattactgtcgcgtgcgctggcg
ggggagcagcggccactggtgttggtggctgatgaccctcgcctggcggccttggcggca
ctcgagctaccgcaagctgaagtccgcttgctggagggcggtcctgatgcctggcgtgcg
gcgggcctggcgctgggagaaggcgtggacacgctgccggatgcgcagtgtatcgatttt
ctgttctttacccatgaccgtcacgcgggcaacaaggatgcggcgcgccaatacctggct
tgggagatcggcttgctggcgcaaatgagcgccgaggaaatcgccagcctcaagccgttg
cacgaaccggttcaaggcgctgtgggcgagcgactccgcacccgtctgatccatggcgca
cgcaccgaaaagggcagcggtgcgagaaccgtcaacgtacccgtcagccgcttgagcacg
gtgctgttcgacaacctggcacagatgcgtgacgcccgttcccggcgtgacagcgagcga
gtcctgacgtatggcgcccgcggcaatccgacggccttcgcgctggaagacttggtcact
gagttggagggaggctaccgcgcccggctgtttggcaccgggttggccgccgtggcgcaa
accttcctggcctacctgcgacctggggatcatgtgctgatcaccgatgcggtctatgcc
ccggtacggcgcgtggcacgggatttcctcgaagccttcggcgtagcggtcgagtacttc
gctcccgatggctgcgacctgcccggacggctgcgagccaacaccaagatggtctacacc
gaagtgcccggctcactgttgtacgagctatgcgacttgccagccatcgccgcactctgc
aaatcccgcggcatcttgctggccgtggacaacacctggggctcgggcgttctgtaccgg
ccactggcgttgggcgccgacatctcgatcatggccctgaccaaatacctgggcggccat
agcgacgtggtgatgggcagcgtttgcacacggcaggaggcgtggccggtactcgcggcc
atgagtgacaccttcggcaataccgtcagcccggatgacgcttacctggtcctgcgcggc
gcccgtaccctggctccacgcctggagacgcatgagcgccaggcactggagatcgcccgt
tggttgcaggcgcaaccgcaggtcaagcgggtcttccatccggcactgcccgagcatccc
ggtcacaggttgtggcaacgggatttcaagggcagcaacgggttgctgtccttcgagctt
cgcgagaaggacgacgcttacctggaacgcttcatcgacgctttgcaggtgttcgggttg
ggggcgtcctggggcgggttcgagagcctggtgacggttgctgacacccaggatcggaac
agtaccgaggaccgggcgttgaatccggtggtccggttgcatgtcgggttggaggacgtc
ggggtattgatcgaggatttgcagcgggggtttatcgccgccggatga
DBGET
integrated database retrieval system