Pseudomonas alvandae B21-020: LOY40_21995
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Entry
LOY40_21995 CDS
T08625
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas01501
beta-Lactam resistance
pcas01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_21995
01503 Cationic antimicrobial peptide (CAMP) resistance
LOY40_21995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_21995
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_21995
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_21995
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LOY40_21995
Transporters [BR:
pcas02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LOY40_21995
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOY40_21995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
Beta-barrel_RND_2
HH_YBHG
BSH_CzcB
HH_EMRA
HH_CyaD
HH_CzcB
YknX_C
Motif
Other DBs
NCBI-ProteinID:
UVM71233
LinkDB
All DBs
Position
4917774..4918931
Genome browser
AA seq
385 aa
AA seq
DB search
MQFKPAVTALVTAIALASLLSGCKKEEAAPAPPPPQVGVVTLKTQPFTLTSELPGRTSAF
RVAEVRPQVNGIILKRLFKEGADVKAGQQLYQIDPAVYEATLKSAEANLRSTKSIADRYQ
QLVNEQAVSRQEYDTAVANRLESEANLQTAQINVRYTKVYAPISGRIGRSSVTEGALVSN
GQTDALATIQQLDPIYVDVTQSSVELLQLRRELESGRLQKAGDNAAMVKLTLEDGSQYPH
EGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQAGVNSAAILAPQQGVTRD
LKGMPTAMVVGADNKVELRQLKASRTVGNQWLIEDGLKAGDRLITEGLQYVRPGVEVKAT
EATNVGAKNPAPAQAADKAAGGKGE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgctctggtcactgccatcgccctggcatcgctgctc
agcggatgcaaaaaggaagaggctgcccctgcgcctccccctccccaggtcggtgtggta
accctcaagacccagccctttaccctgacctccgaactgccgggccgcaccagtgcgttc
cgcgtcgcggaagtgcgcccgcaggtcaacggcatcatcctcaagcgccttttcaaggaa
ggtgccgacgtcaaggccggccagcagctctaccagatcgacccggccgtctatgaggcg
accctcaagagtgccgaggccaacctgcgctccaccaagtcgattgccgatcgctaccag
caactggtcaacgaacaggccgtaagccggcaggaatacgacaccgccgtggccaatcgc
ctggagtcggaagccaacctgcagactgcccagatcaacgtgcgctacaccaaggtctat
gcgcctatttccggtcgcatcggtcgctcctcggtgactgaaggcgccttggtaagcaac
ggtcagaccgatgccctggcgaccatccagcaactggacccgatctacgttgacgtgacg
cagagctccgtcgagctgctgcaactgcgccgcgaactggaaagcggccgcctgcaaaag
gcaggcgacaatgccgccatggtcaagctgacgctggaagacggcagtcagtatccccac
gagggcaaactggaattctccgaagtctcggtcgaccagaccaccggctccgtgaccttg
cgcgccgtgttccccaaccctgaccacaccttgctgccgggcatgttcgtccacgcacaa
ttgcaggccggtgtgaacagcgcggcgatcctggcaccgcagcaaggcgtgacccgcgac
ctcaagggcatgccgaccgcgatggtcgtgggcgccgacaacaaggtcgagctgcgccag
ctcaaggccagccgcaccgttggcaaccagtggctgatcgaagacggcctcaaggccggc
gatcgcctgatcaccgaagggttgcagtacgtacggccaggtgtggaagtcaaggccacc
gaagccaccaacgtaggcgccaagaatccggcccccgcccaggcagctgacaaagccgcc
ggcggcaaaggggagtaa
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