Pseudomonas cavernae: D3880_03340
Help
Entry
D3880_03340 CDS
T08208
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcav
Pseudomonas cavernae
Pathway
pcav01501
beta-Lactam resistance
pcav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_03340
01503 Cationic antimicrobial peptide (CAMP) resistance
D3880_03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcav03036
]
D3880_03340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_03340
01504 Antimicrobial resistance genes [BR:
pcav01504
]
D3880_03340
Chromosome and associated proteins [BR:
pcav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D3880_03340
Transporters [BR:
pcav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D3880_03340
Antimicrobial resistance genes [BR:
pcav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3880_03340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
YknX_C
BSH_CusB
BSH_CzcB
HH_EMRA
CzcB_C
Beta-barrel_RND_2
BSH_YhbJ
HH_YBHG
HH_AAEA_pHBA
Biotin_lipoyl
TssR_C
DUF4407
CC2D1A-B_DM14
ATG14
Motif
Other DBs
NCBI-ProteinID:
AYC31485
UniProt:
A0A385YX37
LinkDB
All DBs
Position
713416..714591
Genome browser
AA seq
391 aa
AA seq
DB search
MLFAVRLPVACQLLVLSGLLATQVQAADAPTGAPPAPEVVVEKVVATPLPLLLEYSGRTA
GYREVEVRAQVSGILQQRTYQEGATVSKDQVLFRIDPRLYQAALAQAKGALAQEQARYRQ
ADRDLKRIRELQKKGFASESELDRYISNFEQSKANIEAAKANVQAKQIDLDYTTVKAPIS
GITSKETVSEGSLVAANDPNSSLLTRLTQLDPLYVNFAYSDTEGARVREGVQSGRLVMPA
DGKLSAVIKFGDGSTYPLEGRVDFTDSFVDTGTGTISARAVLPNPERKLLPGQFVRVLIK
GFVHPQALTVPEQALAQGPKGTFVYVVDEGGVARMREVKTGETAAGRWVIESGIQAGERV
IVEGLPRVRPDAPVKAVEAASQPVDPSAKKS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgctgttcgcctccccgttgcctgccaactcctcgttctcagtggcctgttg
gccacccaggtacaggcagccgatgcgccgaccggagcgccgccagcgcccgaggtggtg
gtcgagaaggtcgtcgccacgccgctgccgctgctgctggaatattccgggcgtaccgcc
ggctaccgtgaggtggaggtgcgtgcccaggtcagcggcatcctccagcagcgtacctat
caggaaggcgcgacggtgagcaaggaccaggtgctgttccgcatcgacccgcgcctgtat
caggcggcgctggcccaggccaagggcgccttggcccaggagcaggcgcgttaccgccag
gccgaccgcgatctcaaacgcattcgcgaactgcagaagaagggtttcgccagcgagagc
gaactggaccgctacatttccaacttcgagcagagcaaggccaatatcgaggcggccaag
gccaacgtgcaggccaagcagatcgacctcgactacaccacggtgaaggcgccgatcagc
ggcatcaccagcaaggaaaccgtctccgagggcagcctggtggcggccaacgacccgaac
tccagcctgctcacccgccttacccaactcgacccgctgtacgtcaacttcgcctattcc
gacaccgagggcgcgcgcgtgcgcgagggtgtgcagagcggccgcctggtgatgccggcg
gacggcaagctgagcgcggtgatcaagttcggcgacggctcgacctacccgctggagggc
cgggtggacttcaccgacagcttcgtcgacaccggcaccggcaccatcagcgcccgtgcg
gtgctgcccaaccccgagcgcaagttgctgcccggccagttcgtgcgggtgctgatcaag
ggcttcgtccatccgcaggcgctcaccgtgcccgagcaggccctggcgcaggggccgaaa
ggcaccttcgtctatgtggtcgacgagggcggggtggcgcgcatgcgcgaggtcaagacc
ggcgagaccgctgccggccgctgggtcatcgagtccggcatccaggccggtgaacgggtg
atagtcgagggcctgccgcgggtgcgcccggatgcgccggtgaaagcggtcgaggccgcc
agccagcccgtcgacccgtccgccaagaaatcctga
DBGET
integrated database retrieval system
