Pseudomonas cavernae: D3880_03345
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Entry
D3880_03345 CDS
T08208
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pcav
Pseudomonas cavernae
Pathway
pcav01501
beta-Lactam resistance
pcav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_03345
01503 Cationic antimicrobial peptide (CAMP) resistance
D3880_03345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_03345
01504 Antimicrobial resistance genes [BR:
pcav01504
]
D3880_03345
Transporters [BR:
pcav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D3880_03345
Antimicrobial resistance genes [BR:
pcav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3880_03345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF2254
HEV_ORF1
Motif
Other DBs
NCBI-ProteinID:
AYC31486
UniProt:
A0A385YXP9
LinkDB
All DBs
Position
714603..717788
Genome browser
AA seq
1061 aa
AA seq
DB search
MFSRFFIDRPIFAAVISIIIILAGLAAMRALPIAQYPEILPPQVSVSASYPGASSQVIAE
TVAAPLEQEINGVQGMIYQLSNSDSNGAMSLTVYFAVGTDPDQATIDVNNKVQAALAKLP
EEVRRQGVKVEKKSSDILQVVTLFSPDNSRDPIFISNYALINVIDELKRIPGVGDASQFG
SKDYSMRIWLRPDKLAQYNLTPSDVVQAIQEQNSQFAAGNFGKEPLHDPQAFTYTVSAKG
RFTKPEEFENIILRTDATGASLLLKDVARVELGALDYSLATSLNGQQNAAFGIYLQPGAN
ALDTADAVRSTMERLAKRFPEGIAYKIPYDTTIFVKVSIEEVIHTFVEALVLVMLVVFIF
LQNWRATLIPVLAIPVSLIGTFAGMYALGFSINLLTLFGMVLAIGIVVDDAIVVLENVER
VMRTEKLGPREAAIKAMEEVTGPIVAIVLVLCAVFVPVGFLGGLAGQMYKQFAITIAVSV
VISGIVALTLSPALCALLLKPEHQEPAAPFRWFNNAFERFTNGYTAGVQFFLKRSLIGLL
LFGGMIAIMVVLFGRVPGSLVPDEDQGYVLNAYFLPPAAALSRTEQVTDAVTEELMQHPS
VQDVVTFAGFDILTSGSRSSAGVSFITLKDWKERSTAELDARNLPPQFMAMAAKQKDAMV
MTFNPPPISGMSTTGGFEAYIQDRSGGSVAQLEDIVHKFMAAAAKRPELAGVNTTFNADV
PQYFINLDRIKARALGVAINDVFTAMQATFGSYYVNDFNLYGRTWQVSLQSEADFRRKPE
DLTQVFVRSSSGDLVPLSSLVSVERILGPDSYARFNVYPAAKLLGGPAPGYSSGQALAAM
QEVADEVLGEQYNLAWIGSAYQELATQGSGSTAFIFGLVLVFLILAAQYERWTLPMAVVT
AVPFAVFGAILAIWLRGLANDVYFQVGLVTLIGLAAKNAILIIEFAVLCREEQGMGIFES
ALEAARLRFRPIVMTSLAFILGCVPLAISSGAGSASRHSIGTGVIGGMLAATLLATFLIP
MFYLLVESAAAKLSGKKEVSDKQVSGLGKDQPASEPPAHLE
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
gtgttctcacgcttctttatcgaccggccgatcttcgccgcggtcatctccatcatcatc
atccttgccgggctcgccgcgatgcgcgcgttgccaatcgcccagtacccggagatcctt
ccgccgcaggtctcggtcagcgccagctacccgggcgccagctcgcaggtcatcgcggaa
accgtggccgcgccgctggagcaggaaatcaacggcgtccagggcatgatctaccagctg
tcgaactccgacagcaacggcgcgatgagcctcaccgtgtacttcgcggtcggcaccgac
ccggaccaggccaccatcgacgtcaacaataaggtgcaggccgcgctggccaagctgccg
gaggaggtgcgccgccagggcgtcaaggtggagaagaagtcctccgacatcctccaggtg
gtgacgctgttctcgccggacaactcccgcgatccgatcttcatcagcaactacgcgctg
atcaacgtgatcgacgaactcaagcgcattcccggggtcggcgacgccagccagttcggt
tccaaggactactccatgcgcatctggctgcgcccggacaagctggcgcagtacaacctg
accccgagcgacgtggtccaggcgattcaggagcagaactcgcagttcgccgccggcaac
ttcggcaaggagccgctgcacgacccgcaggcgttcacctacacggtgagcgccaagggc
cgcttcaccaagcccgaggagttcgagaacatcatcctgcgcaccgacgccaccggcgcc
agcctgctgctcaaggatgtcgcgcgggtcgagttgggcgccctcgactattccctggcg
accagcctcaacggccaacagaacgccgccttcggcatctacctgcagcccggcgccaac
gccctggataccgccgacgccgtgcgcagcaccatggagcgcctggccaagcgcttcccc
gagggcatcgcctacaagatcccctacgacaccaccatcttcgtcaaggtgtccatcgag
gaggtgatccacaccttcgtcgaggcgctggtgctggtgatgctggtggtgttcatcttc
ctgcagaactggcgcgccacactgattcccgtgctggccatcccggtatcgctgatcggc
accttcgccggcatgtatgcactggggttctcgatcaacctgctgaccctgttcggcatg
gtgctggccatcggcatcgtggtcgacgacgccatcgtcgtgctggagaacgtcgagcgg
gtgatgcgtaccgagaagctcggcccgcgcgaggcggcgatcaaggccatggaggaggtg
accggaccgatcgtcgccatcgtcctggtgctctgcgcggtgttcgttccggtcggcttc
ctcggtggcctggctgggcagatgtacaagcagttcgcgatcaccatcgcggtgtcggtg
gtgatctccggcatcgtcgccctgaccctgtctccggcgctgtgtgccttgctgctgaaa
cccgagcaccaggaaccggcggcgccgttccgctggttcaacaacgccttcgagcgcttc
accaacggctacaccgccggcgtgcagttcttcctcaagcgttcgctgattggcctgctg
ctgttcggcgggatgattgccatcatggtcgtgctgttcggccgcgtgccaggctcgctg
gtgccggatgaggatcagggctacgtgctcaacgcctatttcctgccgccggcggccgcg
ctgagccgcaccgaacaggtcaccgacgcggtcaccgaggaactgatgcagcacccgtcg
gtgcaggatgtggtgaccttcgccggtttcgacatcctcacttccggctcgcgcagcagc
gccggggtatcgttcattacgctcaaggactggaaggagcgcagcaccgccgaactcgat
gcgcgcaacctgccgccgcagttcatggccatggccgccaagcagaaggacgccatggtg
atgaccttcaacccgccgccgatcagtggcatgagcaccaccgggggtttcgaggcctac
atccaggatcgcagcggcggcagcgtcgcgcagctcgaggatatcgtccacaagttcatg
gccgcggcggccaagcgcccggaactggccggggtcaacaccaccttcaacgccgacgtg
ccgcagtatttcatcaacctcgaccgcatcaaggcgcgcgccctgggggtggcgatcaac
gatgtgttcaccgccatgcaggcgaccttcggcagctactacgtcaacgacttcaacctc
tacggccgcacctggcaggtcagcctgcagtccgaggcggatttccgccgcaagccggaa
gacctcacccaggtcttcgtgcgttcgagcagcggcgacctggtgccgctgtcctcgctg
gtcagcgtggagcgcatcctcggcccggactcctatgcgcgcttcaacgtctacccggcg
gccaaactgctcggcggcccggcgccgggctacagctccggccaggccctcgccgccatg
caggaagtcgccgacgaagtgctcggcgagcagtacaacctggcctggatcggctcggcc
tatcaggaactggcgacccagggttccggtagcaccgcgtttatcttcggcctggtgctg
gtgttcctgatcctcgccgcccagtacgagcgctggaccctgccgatggcggtggtcacc
gccgtgcccttcgcggtgttcggcgcgattctggcgatctggctgcgcgggctggccaac
gacgtgtacttccaggtcggcctggtgaccctgatcggcctggcggcgaagaacgccatc
ctgatcatcgagttcgccgtactgtgccgcgaggaacagggcatgggcatcttcgagtcg
gcgctggaggcggcgcggctgcgcttccggccgatcgtgatgacctcgctggccttcatc
ctcggctgtgtgccactggccatcagcagcggtgccggttcggcgagccgccactcgatc
ggcaccggggtaatcggcggcatgctcgccgcgaccctgctggcgaccttcctgatcccg
atgttctacctgctggtggaatcggcggcggccaagttgagcgggaagaaagaagtgagc
gataagcaggtgagtgggctcggcaaggaccagccggccagcgagccgccggcgcatctc
gaatag
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