Pseudomonas cavernae: D3880_09800
Help
Entry
D3880_09800 CDS
T08208
Symbol
rlmM
Name
(GenBank) 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
pcav
Pseudomonas cavernae
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcav03009
]
D3880_09800 (rlmM)
Enzymes [BR:
pcav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
D3880_09800 (rlmM)
Ribosome biogenesis [BR:
pcav03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D3880_09800 (rlmM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmM_FDX
RLMM_N
FtsJ
DUF7665
Motif
Other DBs
NCBI-ProteinID:
AYC32661
UniProt:
A0A385Z1W1
LinkDB
All DBs
Position
2119608..2120657
Genome browser
AA seq
349 aa
AA seq
DB search
MNSLLLHCRPGFEGEVCAEISEHAARLNVAGYAKGKPGTAYAEFICSEADGAERLMRGQR
FNRLIFPRQWARGTFVELPESDRISVLLEALAAFPVCGSLWLEVLDTNDGKELSNFCKKF
EAPLRKALNKASKLVEDGHKPRLLLTFKSGREVFLGLAEANNSALWPMGIPRLKFPREAP
SRSTLKLEEAWHFFIPREQWDERLSGEMTGVDLGAAPGGWTYQLVRRGMLVTAIDNGPMA
ESLMDTGLVQHLMVDGFTWKPKQPVDWMVCDIVEKPARNAALLETWIGEGLCREAVVNLK
LPMKQRYAEVRRLLQRLEDGFAARRIKVSIACKQLYHDREEVTCHLRRL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaattctttgttattgcactgccgtcccggtttcgagggcgaggtgtgcgcggaaatc
agtgaacacgccgcccgcctgaacgtcgccggctacgccaagggtaagcccggtacggct
tacgccgagttcatctgcagcgaggcggacggcgccgagcgcctgatgcgcggccagcgc
ttcaaccggctgatcttcccgcgccagtgggcgcgtggaaccttcgtcgagttgccggaa
agcgaccgcatcagcgtgctgctcgaggccctggcggcattcccggtctgcggcagcctg
tggcttgaggtgctcgacaccaacgacggcaaggagctttccaacttctgcaagaagttc
gaggcgcccctgcgcaaggccttgaacaaggccagcaaactggtcgaggacggtcacaag
ccgcgcctgctgctgaccttcaagagtggccgcgaggtgttcctcggtctggccgaggcg
aacaattcggcgctgtggccgatgggcatcccgcgcctgaagttccctcgcgaggcgccg
agccgctcgaccctcaagcttgaggaggcctggcatttctttatcccgcgcgagcaatgg
gatgagcgcctgtcgggcgagatgacgggggtcgacctcggcgccgcgcccggtggctgg
acctatcaactggtccgacgcggcatgctggtgaccgccatcgacaacgggccgatggcc
gagagcctgatggatactgggctggtccagcatctgatggtcgacggtttcacctggaag
ccgaagcagccggtggactggatggtctgcgacatcgtcgagaagccggcgcgcaacgcc
gccttgctggaaacctggatcggcgagggcctgtgccgcgaggcggtggtcaacctcaaa
ctgccgatgaagcagcgctacgccgaggtgcggcgcttgttgcagcggcttgaggacggt
ttcgccgcgcgccggatcaaggtgtcgatcgcctgcaagcagctctaccacgaccgcgag
gaagtgacctgccatctgcgccggttataa
DBGET
integrated database retrieval system
