Pseudomonas cavernae: D3880_10405
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Entry
D3880_10405 CDS
T08208
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pcav
Pseudomonas cavernae
Pathway
pcav01501
beta-Lactam resistance
pcav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D3880_10405
01503 Cationic antimicrobial peptide (CAMP) resistance
D3880_10405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcav03036
]
D3880_10405
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcav02000
]
D3880_10405
01504 Antimicrobial resistance genes [BR:
pcav01504
]
D3880_10405
Chromosome and associated proteins [BR:
pcav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D3880_10405
Transporters [BR:
pcav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D3880_10405
Antimicrobial resistance genes [BR:
pcav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D3880_10405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AYC32771
UniProt:
A0A385Z258
LinkDB
All DBs
Position
complement(2268229..2269374)
Genome browser
AA seq
381 aa
AA seq
DB search
MSFKSAPTALLTAIALATVLLSGCEKQVEQPQQANPQVGVVTLQPQAFAQTSELPGRTSA
FRIAEVRPQVNGIILKRLFTEGSEVKAGQQLYQIDPATYQATFKSAQAAFMSAQSLAGRY
KVLVADRAVSKQEYDEAEAARLRDQAALDSAQINLRYTKVLAPISGRIGRSAVSEGALVN
NGQADAMAVIQQLDPIYVDVTQSTKDILRLRKELASGQLQKAGSHGAKVKLKLEDGSSYA
HEGTLEFAEVSVDSGTGSVILRAVFPNPGHELLPGMFVHAQLLEGLNKQAILAPQQGVTR
DLKGQPTALVVNDQNVVELRQLQAERTVGDQWLVTSGLQAGDRLITEGLQFVHPGSEVKV
VAASNVSVAVQANATNAAQDR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaagtcagcccctaccgccttgctaaccgccatcgccctggccactgtgctg
ctcagtggctgcgagaaacaggtcgagcaaccgcagcaggccaatccgcaagtgggcgtg
gtaaccctgcagccgcaggcgttcgcgcagaccagcgaactgcccggccgcaccagcgcc
tttcgcatcgccgaagtgcgcccgcaggtgaatggcatcatcctcaagcgcctgttcacc
gagggcagcgaggtcaaggccggtcagcagctctatcaaatcgacccggccacttatcag
gccaccttcaagagcgcccaggccgccttcatgtcggcccagtcgctggccgggcgctac
aaggtgctggtcgccgaccgggcggtgagcaagcaggaatatgacgaagccgaagccgcc
cgcctgcgcgatcaggcggcgctggacagcgcgcagatcaacctgcgctacaccaaggtg
ctggcgccgatctccggacgcatcggccgctccgcggtgagcgagggagcgctggtcaac
aatggccaggccgacgccatggcggtgatccagcagctcgacccgatctatgtcgatgtc
acccagtcgaccaaggacatcctgcgtctgcgcaaggagctggccagcggtcagctgcag
aaggccggcagccacggcgccaaggtcaagctgaagctggaggacggcagcagctatgcg
catgaaggcaccctggagttcgccgaagtgtcggtcgacagcggcaccggctcggtgatc
ctccgcgcggtgttccccaaccctgggcatgagctgctgccaggcatgttcgtccacgcc
cagttgctcgaggggctgaacaagcaggccatcctcgccccgcagcaaggcgtgacgcgt
gacctcaagggccaacccacggcgctggtggtcaacgatcagaacgtcgtcgaactgcgc
cagttacaagccgagcgcacggtcggcgaccaatggctggtcacgagcggcctgcaggct
ggagaccggctgatcaccgagggcttgcagttcgtgcatcccggcagcgaggtcaaggtg
gtcgccgccagcaacgtctcggtcgcagtccaggccaatgccaccaacgccgctcaagat
cgctaa
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