Pseudomonas cavernae: D3880_16460
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Entry
D3880_16460 CDS
T08208
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D3880_16460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcav03400
]
D3880_16460 (nth)
Enzymes [BR:
pcav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
D3880_16460 (nth)
DNA repair and recombination proteins [BR:
pcav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
D3880_16460 (nth)
Prokaryotic type
D3880_16460 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Ogg-HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AYC33851
UniProt:
A0A385Z595
LinkDB
All DBs
Position
3606080..3606718
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRQEIFRRLHEDNPDPRTELAYSTPFELLIAVILSAQATDVGVNKATAKLFPVANT
PEAIYALGVEGLSEYIKTIGLFNSKARNVIETCRILVEQHGGQVPQTREELEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIAPGKNVLEVEQKLLKVVPKEFLLDAHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgccaaacgccaggaaatctttcgccgcctgcatgaggacaatcccgacccg
cgcaccgagctggcctactccacgcccttcgagctgctgatcgcggtgatcctctccgcc
caggccaccgacgtcggcgtcaacaaggccaccgccaagctgttcccggtggccaacacg
ccggaggcgatctatgccctgggtgtcgagggtttgagcgagtacatcaagaccatcggc
ctgttcaacagcaaggccaggaacgtcatcgagacctgccgcatcctggtcgaacagcac
ggcggccaggtgccgcagacccgcgaagagctcgaggcgttgcccggggtcggccgcaag
accgccaacgtggtgctcaacaccgccttccgccaactgaccatggcggtggacacacac
atcttccgggtcagcaaccgcaccggcatcgccccgggcaaaaacgtgctggaggtggag
caaaaactgctgaaagtcgtgcccaaggaattcctcctcgacgcccaccactggctgatc
ctgcacggtcgctacgtctgccaggcgcgcaaaccccgctgcggcagttgccggatcgag
gacctgtgcgaatacaaacacaagacctctgacgattga
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