Pseudomonas cavernae: D3880_18325
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Entry
D3880_18325 CDS
T08208
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcav
Pseudomonas cavernae
Pathway
pcav00300
Lysine biosynthesis
pcav00550
Peptidoglycan biosynthesis
pcav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D3880_18325
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3880_18325
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
D3880_18325
Enzymes [BR:
pcav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
D3880_18325
Peptidoglycan biosynthesis and degradation proteins [BR:
pcav01011
]
Precursor biosynthesis
Amino acid ligase
D3880_18325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AYC34197
UniProt:
A0A385Z825
LinkDB
All DBs
Position
complement(4033060..4034523)
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AA seq
487 aa
AA seq
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MPMPLNQLLPQAESAVLIRELSLDSRKVRPGDLFLAVPGVQQDGRTHIADAVARGAAAVA
YEAEGAAVAAAEGVALVPLKGLAGQLSAIAGRFYGEPSRALRLVGVTGTNGKTSVSQLIA
QALDRFGERCGVVGTLGSGFHNALEQGRHTTPDPVGVQATLANLKQAGARAVAMEVSSHG
LDQSRVAALDFDVAVFTNLSRDHLDYHGSMEAYAAAKAKLLAWPSLRCRVLNLDDAFGRQ
LAGEAQPSRLISYSLEDSSAYLFCRDVQFSDDGVRARLITPRGEGSLRSPLLGRFNLSNL
LAVVGALLGLDYPLDEILKVLPDLEGPVGRMQRLGGGQQPLVVVDYAHTPDALEKVLTAL
RPHARGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRSEDPQQIFADIRAGF
RAPGQVSFVAGRGQAIAQLLASAQAADVLVLAGKGHEDYQEIKGQRQPFSDLEEAAKALA
AWEVAHA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgccactcaatcaactgttaccgcaggcggaaagcgcagtgctgatccgcgag
ctgagtctggatagccgtaaggtgcgtccgggcgatctgttcctggctgtgcccggtgtc
cagcaggacggccgcacgcatatcgccgatgccgtcgcccgcggcgccgccgccgtcgct
tatgaggccgaaggtgccgcggtggccgctgccgagggtgtggccctggtgccactaaaa
ggtctggccgggcagctgtcggccatcgccggacgcttctacggcgagccgagccgcgcg
ctgcgtctggtcggggtgaccggtaccaatggcaagaccagcgtcagtcagctgatcgcc
caagccttggaccgcttcggtgagcgctgcggcgtcgtcggtacgctcggcagtggtttc
cacaatgctttggaacaaggccggcacaccacgccggacccggttggcgtgcaggcgacc
ctggccaatctgaagcaggccggtgcccgcgcggtggccatggaggtgtcgtcccacggc
ctcgatcagagtcgcgtcgcggccctcgacttcgatgtcgcggtgttcaccaatctgtcg
cgcgatcacctggattatcacggctcgatggaggcctacgccgccgccaaggccaagctg
ctcgcctggccgagcctgcgctgccgggtactcaacctcgatgacgcgtttggccggcaa
ttggcaggggaggctcagccgtcgcggctgatcagctacagcctggaagacagcagtgcc
tacctgttttgccgcgacgtgcagttcagcgatgacggcgtgcgcgcccggctgatcacg
ccgcgcggcgagggcagcttgcgcagcccgctgctcggccgtttcaacctgagcaacctg
ctggcggtagtgggcgccttgctcgggctggattacccgctggacgaaattctcaaggtc
ctgccggacctggaaggcccagtcgggcgcatgcagcgtctcggcggcggccagcaaccg
ctggtggtggtcgactatgcccacaccccagacgcgctggagaaagtactgacggccctg
cgtccgcatgcccgcggccgtctgctgtgcctgttcggctgcggtggcgatcgcgatcgc
ggcaagcgcccgctgatggccgaggtggtcgaacgtctggccgatggcgtgctggtgacc
gacgacaatccgcgcagtgaagacccgcagcagatcttcgccgacatccgtgctggtttt
cgtgcgccgggacaggtcagtttcgtcgccggtcgcggccaggccatcgcccagttgctc
gcctcggcgcaggccgccgatgtgctggtgctggccggcaaggggcacgaggattatcag
gaaatcaagggccagcgtcagccgttctccgatctggaggaagcggccaaggcgctggct
gcatgggaggtggcgcatgcttaa
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