Afipia carboxydohydrogena: AFIC_000154
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Entry
AFIC_000154 CDS
T08963
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFIC_000154 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcax03400
]
AFIC_000154 (nth)
Enzymes [BR:
pcax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AFIC_000154 (nth)
DNA repair and recombination proteins [BR:
pcax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFIC_000154 (nth)
Prokaryotic type
AFIC_000154 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WEF51708
LinkDB
All DBs
Position
complement(170835..171620)
Genome browser
AA seq
261 aa
AA seq
DB search
MAKKTARASQIRKSGTGTAKSVSQTKPKPAGKVTKKPAQKLKRWSEAEVHTAFARFRAAN
PDPRGELEHLNHFTLLVAVVLSAQATDAGVNKATRNLFPVADTPEKMLALGEAGLREHIK
TIGLYRAKAKNVIALSEQLIAMHGGQVPRTREELEALPGVGRKTANVVLNIAFGEKTIAV
DTHLFRVGNRTYLAPGKTPLEVELELLRVVPDEFMRHAHHWLILHGRYTCIARKPRCEVC
IINDLCRWPEKTTFMEAAESV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaaaacggcgcgagcctcacagattcgtaaatcagggacagggactgcaaag
tccgtatcccagaccaaaccgaaacctgccggtaaggttacgaaaaaacccgctcaaaag
ctcaaacgctggagcgaagccgaggttcacaccgccttcgcgcgatttcgcgccgccaat
cccgatcccaggggcgaactcgaacacctcaaccatttcacgctgctggtcgcggtggtg
ctgtcggcgcaggcgaccgatgccggtgtcaacaaggcgacccgaaatctgtttccggtc
gccgacacgccggagaagatgctggcgctcggcgaggcgggcctgcgcgaacacatcaag
accatcgggctgtaccgggcgaaagccaagaacgtcatcgcgctgtcggagcaattgatc
gcgatgcatggcgggcaggtgccgcgcacgcgagaggagcttgaggcgctgcccggcgtc
ggccgcaagaccgcgaacgtcgtgctcaacatcgcattcggcgagaagaccatcgcggtg
gacacgcatctgttccgcgtcggcaaccgtacgtatctcgcgccgggcaagacgccgctg
gaggtggaactggaattgctgcgcgtggtgccggacgaattcatgcgccacgcccatcac
tggctgatcctgcacgggcgctacacctgcatcgcgcgcaagccgcgctgcgaggtctgc
atcatcaacgatctgtgccgctggccggagaagaccacgttcatggaagccgcagaaagc
gtctag
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