Afipia carboxydohydrogena: AFIC_000961
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Entry
AFIC_000961 CDS
T08963
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcax
Afipia carboxydohydrogena
Pathway
pcax00300
Lysine biosynthesis
pcax00550
Peptidoglycan biosynthesis
pcax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AFIC_000961
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AFIC_000961
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
AFIC_000961
Enzymes [BR:
pcax01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AFIC_000961
Peptidoglycan biosynthesis and degradation proteins [BR:
pcax01011
]
Precursor biosynthesis
Amino acid ligase
AFIC_000961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
hemP
Motif
Other DBs
NCBI-ProteinID:
WEF52472
UniProt:
A0ABY8BW07
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All DBs
Position
1007381..1008823
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AA seq
480 aa
AA seq
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MKLRELFSGDAAFDQQTSELAVAGLAVDSRAVGPGDVFFALGGSKTDGARFIDAAVEAGA
VAIVADHAHSAAVPVIVTSNPRRALALAAAAFYPRQPRTIAAVTGTSGKTSVAAFTRQLW
DSLGYDAASLGTIGIVSRHRNVYGSLTTPDPVALHRALDELAGDGVTHLALEASSHGLDQ
HRLDGVRIAAAAFTNLSRDHMDYHPTVEHYLAAKMRLFTELSREGAPAVIAADHEHSAAV
IAAARARRLDVMTVGRRGESIRLVETAIDGFAQIMTVEHRGQAYRLRLPLVGEFQIENAL
VAAGLVIATGGDAARIFAALGKLEGAKGRLELIGERNDAPVFVDYAHKPDALMKALEALR
PYAKGRLVVVFGAGGDRDAGKRPLMGAIATQYADAVIVTDDNPRSEKPAAIRAEILAAAK
GAKEIGDRAEAIRSAVASLQPGDVLLIAGKGHETGQIVGDKVLPFSDHEAALAALAEHAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaaactacgcgaacttttcagcggtgatgccgctttcgaccagcaaacaagtgagctt
gcggtggcgggactggccgtggacagccgcgccgtggggccgggcgatgtatttttcgca
ctcggcggcagcaagaccgatggcgcacgctttatcgatgcggccgttgaggctggagcc
gtcgcgatcgtggcggatcacgcgcattccgccgccgtgcctgtcatcgttacgtcaaat
ccgcgccgggcgctggcgctggccgccgccgccttttatccgcgtcagccgcgaaccatc
gcagcggtcaccggcaccagcggcaagacctcggtcgcggcgttcacgcggcaattgtgg
gacagcctcggttatgatgcggcaagcctcggcaccatcggcatcgtctcgcgccaccgc
aacgtctacggctcgctgacgacgcccgatcctgtggcgctgcatcgcgccctcgatgaa
ctggcgggcgatggcgtgacgcatctcgcgctggaggcatcctcgcacggtctcgaccag
caccggctcgacggcgtgcggatcgcggcggcggctttcacgaacctgtcgcgcgaccat
atggactatcatccgaccgtcgaacattacctcgcggccaagatgcggttgttcacggaa
ttgagtcgtgagggcgcgcccgcggtaatcgccgccgaccatgaacattccgccgccgtg
atcgcggctgcgcgtgcacgcaggctcgatgtgatgactgtcgggcggcgcggcgaaagc
atccggctcgtcgagaccgcgatcgacggcttcgcgcagataatgacagtcgaacatcgc
gggcaggcgtatcggttgcgcctgccgctggtcggcgaattccagatcgagaatgcgctg
gttgcggcggggttggtgatcgccacgggcggcgatgctgcgagaatcttcgcggcgctg
ggaaagctcgaaggcgcgaaagggcggctcgaattgataggcgagcgaaacgacgcgccg
gtgttcgttgattacgcgcacaagcccgacgcgctgatgaaggcgctcgaggcgctgcgg
ccttacgcgaaaggtcgtcttgtcgtggtgttcggcgcgggcggcgaccgcgacgcgggc
aagcggccgttgatgggcgccatcgccacgcaatatgccgatgcggtgatcgtcaccgac
gacaatccgcgcagcgaaaagcccgccgcgatccgtgccgaaattctggcggcggcaaag
ggcgcgaaggaaatcggcgaccgggcggaagcgatccgctccgctgtagcctcgcttcaa
ccgggtgacgtgttgctgatcgcgggcaagggtcacgagaccgggcagatcgtgggagat
aaagtgttgccgttcagcgatcacgaagcggcgttggccgcgctcgcggagcatgccgca
tga
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