Pseudomonas carboxydohydrogena: AFIC_003065
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Entry
AFIC_003065 CDS
T08963
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00020
Citrate cycle (TCA cycle)
pcax00785
Lipoic acid metabolism
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
pcax01210
2-Oxocarboxylic acid metabolism
Module
pcax_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcax_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AFIC_003065
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AFIC_003065
Enzymes [BR:
pcax01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AFIC_003065
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WEF51472
LinkDB
All DBs
Position
complement(3167291..3170242)
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AA seq
983 aa
AA seq
DB search
MSRQDANANFALTSFLDGANATYIDEMYARYETDPSSLDPEWQSFFKSLNDAPADVEKNA
RGPSWEKPNWPLSPSDDLTNALDGNWAQVEKVMGDKIAKRAATATPAGGTGTQDILQATR
DSVRALMLIRAYRMRGHFHANLDPLGIQEQIGHEELDPKSYGFTDADYDRKIFLDHVLGL
EYGSLREIVTICERTYCQTLGVEFMHISNPEQKAWIQERIEGPDKEISFTREGRRAILMK
LVEAEGFEKFCDLKFTGTKRFGLDGGEALIPALEQIIKRGGNLGVRDIVFGMPHRGRLNI
LTQVMGKPHRALFHEFKGGSANPDEVEGSGDVKYHLGASSDREFDNNKVHLSLTANPSHL
EIVDPVVLGKTRAKQDQNEDPERLSVLPLLMHGDAAFAGQGVVAECFALSDLKGYRTGGS
LHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKVAVEFRQKF
HKPVVIDMFCYRRHGHNEGDEPAFTQPVMYAKIGKHPSTLDIYSRRLIADGVVTEGEVDK
AKADWRARLDAELEAGGGYKPNKADWLDGKWTGFKSSEAGVEPGRVITGVPLEQLKDIGN
KITVAPEGFHLHRTVQRFLENRAKAIDSGEGIDWATGEALAFASLMRDGHNVRLSGQDSE
RGTFSQRHSVLFDQQDESRYTPLNHLGGKVGQYEVINSALSEEAVLAFEYGYSLAEPNTL
TAWEAQFGDFANGAQVVFDQFISSAERKWLRMSGLVCLLPHGYEGQGPEHSSARLERFLQ
MCAEDNIQVANLTTPANYFHVLRRQLAREFRKPLILMTPKSLLRHKRAVSKLEEFGADTS
FHRILRDDAEAGGEIKLVEDARIRRVILCSGKVYYDLLEEREKRGIDDIYLLRIEQLYPV
PLKTMVQVLERFKGAEFVWCQEEPRNMGAWHFIEPYLEWVLNQIGAANKRPRYAGRAAAA
ATATGLMSKHLAQLKAFLDEALG
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccaggacgcgaacgccaatttcgctcttacttccttcctcgacggcgccaat
gccacctacatcgacgagatgtacgcccgctacgagacggacccttcctcgctcgatcct
gaatggcagtcgttcttcaaaagcctcaatgacgctcccgccgacgtcgagaagaatgcg
cgcggcccgtcgtgggaaaagccgaactggccgctgtcgcccagcgacgatctgaccaac
gcgctcgacggcaactgggcgcaggtcgaaaaggtgatgggcgacaagatcgccaagcgc
gcggccaccgccacgccggccggcggcaccggcacgcaggacatcttgcaggcgacgcgc
gattcggttcgcgccctgatgctgatccgcgcctatcgcatgcgcggtcatttccatgcc
aatctcgatccgctcggcattcaggagcagatcgggcacgaagaactcgatccgaaatcc
tacggcttcaccgacgccgattacgaccgcaagatcttcctcgatcatgtgcttggcctc
gaatatggctcgctgcgcgagatcgtcacgatctgcgagcgcacctactgccagacgctc
ggcgtcgaattcatgcacatctccaacccggagcagaaggcatggattcaggaacgcatc
gaaggtccggacaaggaaatcagcttcacccgcgaaggccgccgcgcgattctgatgaag
ctcgtcgaagccgaaggcttcgagaagttctgcgacctcaagttcaccggcaccaagcgg
ttcggtctcgacggcggtgaggctctcattcccgcgctcgaacagatcatcaagcgcggc
ggcaatctcggcgtgcgcgacatcgtgttcggtatgccgcatcgtggacgtctcaacatc
ctgacacaggtgatgggcaagccgcaccgcgcgctgtttcatgaattcaagggcggctcc
gccaatcccgacgaagtcgaaggctcgggcgacgtcaaatatcacctcggcgcctcatcc
gatcgcgagttcgacaacaacaaggtccacctgtcgctgacggcgaacccgtcgcatctc
gagatcgtcgatccggtggtgctcggcaagacccgcgccaagcaggaccagaacgaggac
ccggagcggctctcggtcttgccgctcctgatgcatggcgacgcggcgttcgcgggacag
ggcgtggtggcggaatgcttcgcgctgtcggacctgaagggctatcgcaccggcggttcg
ctgcatttcatcgtcaacaaccagatcggcttcaccacctatccgcgttactcgcgttcc
tcgccgtatccctccgacgtggcgaagatgatcgacgcgccgatcttccacgtcaacggc
gacgatcccgaagcggtggtgttcgccgccaaggtcgcggtcgaattccggcagaaattc
cacaagccggtcgtcatcgacatgttctgctaccgccggcatggccacaacgaaggcgac
gagcctgcgttcacccagccggtgatgtacgccaagatcggcaagcacccctccacgctc
gatatctattccaggcggctgatcgccgatggcgtggtgaccgagggcgaggtcgataag
gccaaggccgattggcgcgcgcggctcgatgccgagcttgaggccggcgggggctacaag
ccgaacaaggccgactggctcgatggcaagtggaccggattcaaatcgtccgaggccggc
gtcgaaccgggccgcgtgatcaccggcgtgccgctcgaacagctcaaggacatcggcaac
aagatcaccgtggcgcccgagggcttccacctgcatcgcacggtgcagcggttccttgaa
aaccgcgccaaggcgatcgatagcggcgagggcatcgactgggcgaccggcgaggcgctg
gcgttcgcctcgctgatgcgcgacggccacaatgtccgcctgtcggggcaggattcggag
cgcggcacgttctcgcagcgtcactcggtgctgttcgaccagcaggacgagagccgctac
acgccgctcaaccatctcggcggcaaggtcggccaatacgaggtcatcaactccgcgttg
tccgaggaggcggtgcttgcgttcgaatacggctactcgctggccgagccgaacacgctg
acggcgtgggaagcgcagttcggcgatttcgccaatggcgcgcaggtggtgttcgaccag
ttcatttcctcggccgagcgcaaatggctgcgcatgtccggcctcgtctgtctgctgccg
catggctatgaagggcaagggccggagcattcatcggcgcgtctggagcgcttcctgcaa
atgtgcgcggaagacaatatccaggtcgccaacctcaccacgcccgcgaattatttccat
gtcctgcggcgtcagctcgcgcgcgaattccgcaagccgctgatcctgatgacgccgaag
tcgctgctgcggcacaagcgcgccgtgtcgaaactcgaggagttcggggccgacacctcg
ttccaccgcatcctgcgcgacgacgctgaggcgggcggcgagatcaagctggtggaggac
gccaggattcgccgcgtcatcctctgctcgggcaaggtctattacgatcttctcgaggag
cgcgagaagcgcggcatcgacgatatctatctgctgcgcatcgaacagctttatccggtg
ccgctgaagacgatggtgcaggtgctggaacgcttcaagggcgcggagtttgtctggtgc
caggaagagccgcgcaacatgggcgcctggcacttcatcgagccgtatctggagtgggtg
ctcaatcagatcggtgcggcgaacaagcgtccgcgttatgccggacgtgccgccgccgcc
gcgaccgcgaccgggttgatgtcgaagcatctcgcccagttgaaggcgttccttgacgag
gcgctcggctga
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