Pseudomonas carboxydohydrogena: AFIC_003066
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Entry
AFIC_003066 CDS
T08963
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pcax
Pseudomonas carboxydohydrogena
Pathway
pcax00020
Citrate cycle (TCA cycle)
pcax00270
Cysteine and methionine metabolism
pcax00620
Pyruvate metabolism
pcax00630
Glyoxylate and dicarboxylate metabolism
pcax00680
Methane metabolism
pcax00710
Carbon fixation by Calvin cycle
pcax00720
Other carbon fixation pathways
pcax01100
Metabolic pathways
pcax01110
Biosynthesis of secondary metabolites
pcax01120
Microbial metabolism in diverse environments
pcax01200
Carbon metabolism
Module
pcax_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pcax_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pcax_M00012
Glyoxylate cycle
pcax_M00168
CAM (Crassulacean acid metabolism), dark
pcax_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pcax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AFIC_003066 (mdh)
00620 Pyruvate metabolism
AFIC_003066 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
AFIC_003066 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
AFIC_003066 (mdh)
00720 Other carbon fixation pathways
AFIC_003066 (mdh)
00680 Methane metabolism
AFIC_003066 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AFIC_003066 (mdh)
Enzymes [BR:
pcax01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
AFIC_003066 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
WEF51473
LinkDB
All DBs
Position
complement(3170519..3171487)
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AA seq
322 aa
AA seq
DB search
MARNKIALIGSGQIGGTLAHLVGLKELGDVVMFDIAEGIPQGKSLDIAQSSPISGFDAEM
KGTNSYEALAGADVCIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGISKYAPDAFVICIT
NPLDAMVWALQKASKLPAKKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDSM
VPLTRYSTVAGIPLPDLVKMGWTSQARIDEIVTRTRNGGAEIVNLLKTGSAFYAPAASAI
AMAESYLRDKKRVVPCAAYLNGEYGVKDTYVGVPVVIGAKGVERVVEIELTGKDREAFDK
SVEAVQTLTDACKKIAPDLLGK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtaacaagattgcgttgatcggttctggccagatcggcggcacccttgcccat
ctcgtcggcctgaaagagctcggcgacgtcgtgatgttcgacatcgccgagggcatcccg
cagggcaaatcgctcgatatcgcgcagtcctcgccgatcagcgggttcgatgccgagatg
aaaggcaccaattcgtatgaggcgcttgcgggcgcggatgtctgcatcgtcaccgccggc
gtgccgcgcaagcccggcatgagccgtgacgatcttctgggcatcaatctcaaggtgatg
gaacaggtcggcgcgggcatttcgaaatacgcccccgacgccttcgtgatctgcatcacc
aacccgctcgacgcgatggtgtgggcgttgcagaaggcgtccaagctgcccgcgaagaaa
gtggtcggcatggccggcgtgctggattcggcgcgcttccgttatttcctcgccgacgag
ttcaatgtttcggtcgaggacgtcaccgcgttcgtgctcggcggtcacggcgattccatg
gtgccgctgacgcgctattccaccgtcgcgggcatcccgctgccggacctcgtgaagatg
ggctggacctcgcaggcgcggatcgacgagatcgtcacccgcacccgcaacggcggcgcc
gagatcgtcaacctgctcaagaccggctcggctttctatgcgccggcggcgtccgccatc
gcgatggcggaaagctatctgcgcgacaagaagcgggtggtgccgtgcgcggcctatctc
aacggcgagtacggcgtgaaggacacctatgtcggcgtgccggtggtgatcggcgccaag
ggtgtcgagcgcgtcgtcgaaatcgagctgacgggcaaggaccgcgaagccttcgacaag
tcggtcgaggccgtgcagaccctcaccgacgcctgcaaaaaaatcgcacctgatctgctc
ggaaaataa
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