KEGG   Plasmodium chabaudi: PCHAS_1028700
Entry
PCHAS_1028700     CDS       T01108                                 
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B, putative
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
pcb  Plasmodium chabaudi
Pathway
pcb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PCHAS_1028700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcb03019]
    PCHAS_1028700
   03041 Spliceosome [BR:pcb03041]
    PCHAS_1028700
   03032 DNA replication proteins [BR:pcb03032]
    PCHAS_1028700
Messenger RNA biogenesis [BR:pcb03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     PCHAS_1028700
Spliceosome [BR:pcb03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PCHAS_1028700
  U2 snRNP components
    PCHAS_1028700
 Complex B
  U1 snRNP components
    PCHAS_1028700
  U4/U6.U5 tri-snRNP components
    PCHAS_1028700
 Complex C
  U2 snRNP components
    PCHAS_1028700
DNA replication proteins [BR:pcb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PCHAS_1028700
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 3492456
NCBI-ProteinID: XP_739397
UniProt: A0A077YF16
LinkDB
Position
10:1109719..1110414
AA seq 192 aa
MGKNYRLESWLQYRVRVTISDTRYYVGTFLSYDRHMNIVLVDAEEFRRVKCKENNSKEIK
RVVGLILIRGDNIVSFTAERAPVNKKTTSNITNKGIATGRGISLNNYVPMQNNMAPNMPT
GVGLNMGTSKNLTPTVNPGFRPPNIPMNNRPLMPMGMQMNPNLGPPNSARGLPPQIPTQL
PFPPNAKPPTEQ
NT seq 579 nt   +upstreamnt  +downstreamnt
atgggaaaaaactatcgattagaatcatggctacaatatagagtaagagtaacaataagt
gatacaagatattatgttgggacttttctttcatatgataggcatatgaatatagtttta
gttgacgcagaagagtttaggagagtaaaatgtaaagaaaacaactctaaggaaataaaa
agagtggttggtcttatattaataagaggggataatatagtttcattcacagcagaacgt
gcaccagttaataaaaaaacgacaagtaatataacaaataaaggtattgctactggtcga
ggtatatccttaaataattatgtacctatgcaaaataatatggctcctaatatgccaaca
ggtgtaggtctaaacatgggtacatcaaaaaatttaacaccaacagtaaatcctggtttt
agaccaccaaatattccaatgaataatagaccccttatgcccatgggtatgcaaatgaat
cccaacttaggacctccaaatagtgcacgaggattaccacctcaaatccctacccaatta
ccattcccacctaatgctaaaccaccaacagagcaatag

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