Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_035810
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Entry
PCC21_035810 CDS
T02320
Name
(GenBank) UDP-3-O-3-hydroxymyristoyl
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00540
Lipopolysaccharide biosynthesis
pcc01100
Metabolic pathways
Module
pcc_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PCC21_035810
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
PCC21_035810
Enzymes [BR:
pcc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PCC21_035810
Lipopolysaccharide biosynthesis proteins [BR:
pcc01005
]
Lipid A
PCC21_035810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AFR04984
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All DBs
Position
complement(4071137..4072069)
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AA seq
310 aa
AA seq
DB search
MRDKMMIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAK
SVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIDVDAPEIPIMDGSASPFVYLL
LDAGIEELNCAKKFVRIKQPVRVEDGDKWAEMKPFNGFSLDFTIDFNHPAIDAGNQRYRL
DFSADAFVRQISRARTFGFMRDIEYLQSRGLCLGGSMDCAIVVDDYRVLNEDGLRFEDEF
VRHKMLDAIGDLFMCGHNIIGAFSAFKSGHALNNKLLQAVLANQEAWEYVTFEDEAEMPL
AFKAPSIVLA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgagataaaatgatgatcaaacaacgtacattaaaacgtattgttcaggcgactggt
gtcgggttacataccggcaagaaggtcacgttgaccatgcgtcctgcaccggcaaatacc
ggggtcatctatcgccgcacagacttgaatcccccggttgattttccggctgatgcaaaa
tccgtgcgtgataccatgctctgtacttgcctggttaatgagcatgacgtccgtatttct
acggtggagcatcttaacgctgcgcttgcagggttgggcattgacaatattgtcattgat
gttgacgcgccagaaattccaattatggatggcagcgccagcccgttcgtttacctgctg
ttagatgccggtatcgaagagctgaattgtgccaagaaattcgtacgtatcaaacagccc
gttcgcgttgaagacggcgacaagtgggccgagatgaaaccgtttaacggcttcagcctg
gatttcactatcgacttcaaccacccggcgattgatgcgggcaaccagcgctatcgtttg
gatttctccgctgatgcgtttgttcgccagatcagccgtgcgcgtacattcggcttcatg
cgcgatatcgaatacttgcagtctcgtgggttgtgcctgggcggcagtatggattgtgcc
atcgtcgttgacgattaccgcgtactgaacgaagacggtctgcgttttgaagatgagttt
gttcgccataaaatgttggatgccattggtgacctgtttatgtgtggccacaacatcatc
ggtgcgttctctgcgtttaaatctggacacgcactgaacaacaaactgttgcaggctgtg
ctggcaaatcaggaagcgtgggaatacgtgacctttgaagacgaagctgaaatgccgttg
gcatttaaagcaccgtctatcgtgctggcgtaa
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