Pectobacterium carotovorum subsp. carotovorum PCC21: PCC21_035920
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Entry
PCC21_035920 CDS
T02320
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pcc
Pectobacterium carotovorum subsp. carotovorum PCC21
Pathway
pcc00300
Lysine biosynthesis
pcc00550
Peptidoglycan biosynthesis
pcc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PCC21_035920
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PCC21_035920
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
PCC21_035920
Enzymes [BR:
pcc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PCC21_035920
Peptidoglycan biosynthesis and degradation proteins [BR:
pcc01011
]
Precursor biosynthesis
Amino acid ligase
PCC21_035920
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AFR04995
LinkDB
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Position
complement(4084029..4085516)
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AA seq
495 aa
AA seq
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MADRNLRDLLAPWVQDTPARALREMTLDSRVAAAGDLFVAIVGHKADGRRYIPQAIAQGV
AAIVAEAEGEAADGTVREMHGVPVVYLSNLNQRLSALAGRFYQQPAEKLQLIGVTGTNGK
TTTTQLLAQWSQALGETSAVMGTVGNGLLGRAIPTENTTGSAVDVQQVLSQLVDQGATFA
AMEVSSHGLVQHRVAALPFAAAVFTNLSRDHLDYHGDMESYEAAKWALFSEHRVGQMIIN
ADDDVGLRWLAKLPDAVAVTMENNLVPGCRGRWLKATQIDYHDNGATIAFDSSWGHGEIE
SRLMGAFNVSNMLLALATLLSLGYPLDKLVIAGSQLQPVCGRMEVFHAEAKPTVVVDYAH
TPDALEKALEAARLHCQGKLWCVFGCGGDRDKGKRPLMGGIAEQLADRVVVTDDNPRSEE
PQAIVADILSGLLDAGRVQVIHGRAEAVTSAIMQAQENDVVLVAGKGHEDYQLVGNQRLD
YSDRITVARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgatttacttgcgccgtgggtgcaagacactccggcgcgc
gcgctgcgggaaatgacattagacagccgcgttgcggctgccggggatctgtttgtcgcg
attgtcgggcacaaagcagatggacggcgctatattccgcaggcaattgcgcaaggcgta
gcagcgattgttgccgaagctgaaggtgaggccgctgatggcaccgttcgcgaaatgcac
ggtgtgccggtggtgtatctcagcaacctgaaccagcggctgtccgcgctggcaggccgt
ttttatcagcagcctgcggaaaagttacagctgattggcgtaacgggaaccaacggaaaa
acgacgacaactcagcttctggcgcagtggagtcaggcattaggcgaaacgagtgccgtg
atgggcaccgtaggcaatggcctattaggtcgggcgattccgacagagaatacgacaggg
tctgctgtcgatgttcagcaggtgcttagccaactggtcgatcaaggtgcgacgttcgcc
gccatggaagtgtcttcccacggcctggtgcagcatcgtgtggctgcgttgccgttcgcg
gcggcggtgttcactaacctgagccgcgatcatcttgattaccatggcgatatggaaagc
tacgaagcggccaaatgggcactgttctccgagcatcgtgttgggcagatgattatcaac
gcggatgacgacgtcggactacgctggttggcgaagctgccggatgcggttgccgttact
atggaaaacaatcttgtccccggctgccgtgggcgctggctgaaagcgacacagattgat
tatcacgataacggtgccacgattgcgtttgattcaagctgggggcatggcgaaattgaa
agccgcctgatgggcgcgtttaacgtcagcaatatgctgctggcgctggcaacgctgctg
tctctgggctatccgctcgataaattggttatcgcgggttctcaactgcaaccggtatgt
ggccgcatggaagttttccatgctgaagcaaaaccaacggtcgttgtggattacgcccac
acgccagacgcgctggaaaaagcgcttgaagcggcacgcttgcactgtcaggggaaactc
tggtgtgtgtttggctgtggtggcgatcgtgataaaggtaagcgcccacttatgggcggt
atcgcagaacaactggccgaccgcgttgtggttaccgatgataacccgcgtagtgaagag
cctcaggcaattgttgccgatattctctccgggctgctggatgccgggcgcgttcaggtg
attcacggacgtgctgaagcggtcactagcgcgattatgcaggcgcaggaaaatgacgtg
gtgctggttgcgggtaaagggcacgaagactaccaactggtgggcaatcagcgtctcgat
tattccgatcgcatcaccgttgcccgcctgctgggggtgattgcatga
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