Mixta calida: C2E16_04275
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Entry
C2E16_04275 CDS
T05419
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pcd
Mixta calida
Pathway
pcd00540
Lipopolysaccharide biosynthesis
pcd01100
Metabolic pathways
Module
pcd_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C2E16_04275 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
C2E16_04275 (lpxC)
Enzymes [BR:
pcd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
C2E16_04275 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pcd01005
]
Lipid A
C2E16_04275 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AUY24205
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All DBs
Position
908819..909736
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVSLTLRPAPANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDEGVRISTVEHLNAALAGLGIDNIIVEVDAPEVPIMDGSAAPFVYLLVDAGV
EELNSPKKFVRVKQAVRVEDGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYQLNFSTE
AFMRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEEGLRFEDEFVRHKM
LDAIGDLFMCGHNIVGAFSAYKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPVAFRAT
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaacggacattaaaacgtattgttcaggcgactggcgtcggtttgcatacc
ggcaagaaagtctccctgacgttacgccctgcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgatttcccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaatgatgaaggcgtgcgtatctctaccgtagaacacctg
aacgctgcgctggcaggtctcggcatcgacaacattattgtcgaagtggacgcgccggaa
gtgccgatcatggacggcagcgccgcgccattcgtctacctgctggttgacgcgggcgtg
gaagagctgaacagcccgaagaaattcgtgcgcgttaagcaggccgtgcgtgttgaagat
ggcgataagtgggctgaaattaaaccgtacaacggtttttcgctcgactttacgatcgat
ttcaaacatccggcgatcgactccagctcacagcgctatcagctgaatttctctacggaa
gcgtttatgcgccagatcagccgcgcgcgaacctttggctttatgcgtgaaatcgaatac
ctgcagtccaaaggcctgtgcctgggcggtagtttagattgcgcgattgggttagacgat
ttccgcgtactgaacgaagaaggtttacgcttcgaagatgaattcgttcgtcacaaaatg
ctggatgctatcggcgacctgtttatgtgcggccacaatattgtcggcgcgttttccgcc
tacaaatcaggtcatgcgctgaacaacaagctgttgcaggcagtgctggcgaaacaggaa
gcctgggaatgggcgacctttgaagacgaagctgaactgccggtggcattcagggcaaca
aatctggttctggcgtaa
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