Mixta calida: C2E16_05850
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Entry
C2E16_05850 CDS
T05419
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
pcd
Mixta calida
Pathway
pcd01501
beta-Lactam resistance
pcd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C2E16_05850
01503 Cationic antimicrobial peptide (CAMP) resistance
C2E16_05850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcd02000
]
C2E16_05850
01504 Antimicrobial resistance genes [BR:
pcd01504
]
C2E16_05850
Transporters [BR:
pcd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C2E16_05850
Antimicrobial resistance genes [BR:
pcd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C2E16_05850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AUY24483
UniProt:
A0ABN5H7Z4
LinkDB
All DBs
Position
complement(1250615..1253764)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAKFFIDRPIFAWVIAIIIMLAGALSILKLPIEQYPNVAPVAIQISANYPGADAKTLQDS
VTQVIEQNMNGIDGLMYMSSNSDSSGSLQLTLSFQSGTDADIAQVQVQNKLQLAMPLLPQ
EVQQQGIQVEKSSSSFLMVAGFVSEDGSMSQNDIADFVSSNIKDPISRTTGVGDTQLFGA
QYAMRIWMDPHKLNNYQLTPVDVVNAISTQNAQVAAGQLGGTPPVKGQQLNASIIAQTRL
TSTEEFGKILLKVNPDGSQVRLRDVATIELGGENYEIIARFNGQPASGLGIKLATGANAL
DTADAVKAELARLSPTFPAGLKVVYPYDTTPFVKISIFEVVKTLFEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAIINAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATRKSMDQIQGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMVL
SVIVALILTPALCATLLKPIKRGDHGKTTGFFGWFNRLFDKSTNHYVDSVGHIVRSTGRY
LLIYLFIVVGMAVLFMRLPTSFLPEEDQGLLLAQAQLPAGATQERTQKVLDQVSNYFLTK
EKASVQSVFTVNGFGFAGRGQNTGIAFVSLKPWDERGGSENKVPAIAGRAMQALSTIKDA
MVIPFNLPAIIELGNATGFDFELIDQANLGHDKLTQARNQLLGMVAQHPDTVVGVRPNGL
EDTPQYKLTVDQEKAQALGVSISDINTTLGAAWGGSYVNDFIDRGRVKKVYVMGKADSRM
LPDDINKWYVRASNGDMVPFSAFSTARWQYGSPRLERYNGLPSMEILGQAAPGRSSGDAM
ALMEQLASQLPQGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFAV
MLVVPLGVIGALIFTTLRGLSNDVYFVVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLV
EATLEATRMRLRPILMTSLAFILGVLPLAISTGAGSGAQNAVGTGVMGGMVTATVLAIFF
VPVFFVVVRRRFSKHKEELEQGHPVEHQH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatcgatcgccccattttcgcgtgggtcatcgccatcattattatg
ctggcgggtgcgctatcgattcttaagctgccgattgagcaatatcccaatgttgctcct
gtagcgatacagattagtgcaaactaccccggcgccgatgcgaaaacgctgcaggattcg
gtcacgcaggttatcgagcagaatatgaacggtatcgacggactgatgtatatgtcctcg
aacagtgattcttccggctcgctgcagttgacgctctctttccagtccggcactgacgcc
gatatcgcccaggtgcaggtgcagaataaactgcagctggcgatgccgctgctgccgcag
gaagtgcagcagcagggtatccaggtagagaaatcgtccagcagcttcttgatggtcgcc
ggcttcgtgagtgaggacggcagcatgtcgcagaacgatatcgccgacttcgtctcttct
aacatcaaggatcccatcagccgcaccaccggcgttggcgatacccagctgtttggcgcg
cagtatgcgatgcgtatctggatggacccgcataagctgaataactatcagctgacgccg
gtcgacgtcgtaaacgctatctccacccagaacgcccaggtcgccgcaggtcagcttggc
ggtacgccgccggtgaaaggccagcagcttaacgcctcgatcattgcgcaaacgcgtctg
acttcaacggaagagttcggtaaaattttgctgaaagttaacccggatggctcgcaggta
cgtctgcgcgatgtcgccactattgagctgggcggggaaaactacgagatcattgcgcgc
tttaacggacaaccagcttccggtctggggatcaaactggcgaccggcgctaacgcgctg
gatactgcggatgcggtaaaagcagagctggcacgcctttcgcctaccttcccggcaggc
ctgaaggtggtttacccttatgacaccacgccgtttgttaaaatctccattttcgaggtg
gtgaaaacgctttttgaagcgatcgtgctggtgttcctggtaatgtatctgttcctgcag
aacttccgcgccacgctgatcccaaccattgcagtgccggtggtgctgctgggtacgttc
gctatcattaacgcgttcggctattcgataaacacgctgacgatgttcgggatggtgctg
gccatcggcctgttggtggatgacgccatcgtcgtggtggaaaacgtcgagcgtgtcatg
gcggaagaaggtttgccgccgaaagaagcgacgcgcaaatcgatggaccagatccagggc
gccctggtgggtatcgcgctggtgctctctgcggtctttatcccgatggccttcttcggc
gggtcgaccggggttatctaccgtcagttctccatcaccatcgtttccgccatggtgctg
tcggtcatcgtcgcgctgatcctgacgcccgcgctctgcgccaccctgcttaagccgatt
aagcgaggcgatcacggcaagacgaccggcttcttcggctggtttaaccgcctgttcgac
aagagcaccaaccactacgtagacagcgtggggcatatcgtccgcagcactggtcgttat
ctgctgatctacctgtttatcgtggtcggcatggcagtgctgtttatgcgtctccctacc
tccttcctgccggaagaggaccagggtctgctgttggcccaggcgcagctgcccgctggc
gccacgcaggagcgtacgcagaaagttctcgaccaggtcagtaattattttctgaccaaa
gagaaagccagcgtgcagtcggtgtttacggttaacggcttcggctttgccggtcgcggt
cagaataccggtatcgccttcgtcagtctgaagccgtgggacgagcgtggcggctcagaa
aacaaggtgcccgcaatcgcaggccgcgccatgcaggcgctgagcaccatcaaagacgcc
atggttattccatttaacctgccggcaattatcgaactgggtaacgccaccggcttcgac
tttgaactgatcgaccaggcgaacctgggtcacgataagctgacgcaggcccgtaaccag
ctgttaggcatggtggcgcagcatccggataccgttgtcggcgtacgccctaacggtctg
gaagatacgccgcagtataagctgacggtggatcaagagaaggcgcaggcgctgggcgtc
tccatctctgatatcaacacgacgctgggcgccgcctggggtggctcctatgtgaacgac
tttatcgatcgcggtcgtgtgaagaaagtgtatgtgatgggtaaggctgattctcgtatg
ctgccggacgatatcaataaatggtacgtacgcgcttctaacggggatatggtgcccttc
tccgccttctcaacggcgcgctggcaatatggttcgccgcgtctggagcgctataacggc
ttgccgtccatggaaattctgggtcaggccgcgccgggacgcagctccggcgacgcgatg
gcgctgatggaacagctggcttctcagctgccgcagggcatcggctatgactggacgggc
atgtcctatcaggaacgcctttccggcaaccaggcgcctgcgttgtacgctatctctctc
atcgtggtgttcctgtgtctggccgcgctctatgagagctggtcgattccgttcgccgta
atgttggtggtgccgctgggcgttatcggcgcgctgatcttcactaccttgcgcggtctg
agcaacgatgtttacttcgtggtaggcctgctgacaaccattggcctgtcggcgaagaac
gccatcctgattgtggaattcgccaaggatctgatggagaaggagggcaaaggcctggtg
gaagcgacgctggaagcgacacgcatgcgtctgcgtcccatcctgatgacctcactggcc
tttattctgggcgtactgccgctggctatcagtactggcgcaggctccggcgcgcagaat
gcggtaggtaccggtgtaatgggcggtatggttactgcgaccgtgttggctatcttcttt
gtgccggtcttcttcgtggtggttcgccgccgcttcagcaagcataaagaagagctggaa
cagggccatcctgttgaacaccagcactaa
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