Mixta calida: C2E16_07365
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Entry
C2E16_07365 CDS
T05419
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pcd
Mixta calida
Brite
KEGG Orthology (KO) [BR:
pcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcd03009
]
C2E16_07365
Enzymes [BR:
pcd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
C2E16_07365
Ribosome biogenesis [BR:
pcd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C2E16_07365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_11
DUF4239
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AUY24738
LinkDB
All DBs
Position
1556386..1557513
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AA seq
375 aa
AA seq
DB search
MHCALYDADRCRSCQWLTLPYPQQLRQKQDHLQALLTDITVGEWRSPVSSPQQAFRNKAK
MVVSGSVERPVLGIVQRDGSPVDLTACPLYPASFAPVFEVLKPFIARAGLTPYNVARRRG
ELKFLLLSESALDGRLMLRFVLRSQAKLDQLRAALPWLQQQLPQLSVISANIQPVHMAIL
EGEEEIALTENQALAEQLNHVPLWIRPRSFFQTNPAVAAQLYDTARQWVSELNIHAMWDL
FCGVGGFGLHCATPEMRLTGIEISAEAIACAQRSAQQLGLKKVQFAALDSTRFATGEEAV
PELVLVNPPRRGIGAELCDYLSRMAPAWLLYSSCNAETMAQDIARLENYRVLRVQLFDMF
PHTTHYEVLTLLQRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcgctttacgatgcagaccgctgtcgctcctgtcagtggctgacactccct
tatccccaacagctgcggcagaagcaggatcatttgcaggcgctgctcaccgatataacg
gtcggcgaatggcgttcgccggtgagctcgccgcagcaggcgtttcgcaacaaggcgaaa
atggtggtaagcggcagcgtcgagcgcccggtgctgggcatcgtacagcgcgacggcagc
ccggtcgatctcaccgcctgtccgctctatcccgccagctttgcgccagtgttcgaggtg
ctgaagccctttatcgcccgcgccggtctgacgccctataacgtggcgcggcggcgcggc
gagctgaagttcctgctgttgagcgaaagcgcgctcgacggcaggctgatgctgcgcttt
gtgctgcgatcgcaggcgaagctggaccagctgcgcgccgcgctgccgtggttacagcag
cagctaccgcagctgtcggtgatctccgccaatatccagccggtgcatatggcgattctg
gaaggggaggaggagatcgcgctgacggaaaatcaggcgctggcggaacagctgaatcac
gtcccgctctggattcggccgcgcagcttttttcagaccaacccggcggtggcggcgcag
ctgtatgacaccgcgcgtcagtgggtcagcgagctgaatatccatgccatgtgggatctt
ttctgcggcgtcggcggttttgggctgcattgcgccacgccggagatgcgcctgaccggg
attgagattagcgccgaggcgatcgcctgcgcgcagcgttcggcgcagcagcttggactg
aaaaaggtgcagtttgcggcgctcgactccacgcgcttcgccacgggcgaagaggcggtg
ccggagctggtgcttgttaacccgccgcgtcgcggcatcggcgccgaactgtgcgattat
ctgagtcgtatggcgccggcgtggctgctctattccagctgcaacgctgagactatggcg
caggatattgcccgtctggagaattatcgcgtgctgcgcgtgcagctgttcgatatgttt
ccgcataccacgcactatgaggtgttgacgctgctgcaacgcaggtaa
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