Polistes canadensis: 106786814
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Entry
106786814 CDS
T05611
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pcf
Polistes canadensis
Pathway
pcf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106786814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcf03041
]
106786814
Spliceosome [BR:
pcf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106786814
Complex C
U5 SnRNP specific factors
106786814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
106786814
NCBI-ProteinID:
XP_014604091
LinkDB
All DBs
Position
Unknown
AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASESEDETEYGNVGDDAEDRERSDEEMEDDKDESRDNAEQGLS
TAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIEPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLIRQTHPHIHSVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNVFDTPGHVNFSDEATAAIRLSDGAILIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLVLELKLPPLDAYYKLRHIIEEINGLIALYS
DSENTAFVSPAIGNVCFASSEYNVCFTLKSFAALYAKSYPSLNTNEFSKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPYVLSELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVMHVPSPQAHAPIKVQHVYTGPIDSPLAQDMVNCDPEG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELSRVPAGNWVLIEGIDRPIVKTSTITDLNNTDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
KLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLSSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYF
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKTITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgacctttacgatgaatttggtaattacattggaccggacttagcatcagag
agcgaagatgaaacagaatatggaaatgttggagatgatgcagaagatagggagcgttct
gatgaggagatggaagatgacaaagatgaatctagagataatgcggagcaaggtttatct
acagctgttgttttacacgaagataaaagatattatcctagtgcgctagaagtatatggt
ccagaggttgaaactctcgtacaagaagaagatgcgcaaccattagataaacctttgata
gaacctactaggaaacctaaatttcaaataaaacaacaacaacttccagagacaacttat
agcattgaattcttagctgacatgatggatgctcctcatttaattagaaacgtcgtatta
cttggacatttgcatcatggaaaaactactttagttgactgtcttatacgacaaacgcat
cctcatatacacagtgtaaccgatgaaaaacctttgaggtatacggatactttgtttact
gagcagcaacgtggagtatctacaaaagcaacacctgtgactctgctgttacaagatgtt
aaatcaaaatcatatttgttaaatgtatttgatactccaggtcatgtgaatttttcggat
gaagcaacagcggctattcgtttgtcagatggtgcaatacttatcgttgatgcagcagaa
ggtgtaatgcttaacacggaacgtttattaaagcatgcattacaagaaaaattagcgcta
actgtatgcatcaacaaaatagatcgtcttgttctggaattaaaattaccacctttagat
gcatattataaattacgacatatcattgaagaaatcaatggtttaatcgcattatattca
gatagcgaaaatacagccttcgtttcaccagctatcggaaatgtgtgtttcgcaagttcc
gaatataacgtctgttttactcttaaatcttttgctgccctttatgccaaaagttaccca
tcacttaacacaaatgaattctcaaaaagattatggggagatatatactttaattcgaaa
acacgaaagtttactaagaaacccccacataatacagcgcaacgtagttttatcgaattt
atattggaaccgctttataaaatatttgcacaagttgttggggatgtggatacaacttta
ccttatgtgctcagcgaattaggaattagattgacgtcggaagaaatgaaaatgaatatt
aggccactattgcgtttggtgtgcacacgttttttgggagacatgtgtggtttagtcgac
atgtgtgttatgcacgttccaagtccacaagcacatgcaccaataaaagttcagcacgtt
tacacaggtcctatagactctcctcttgcacaggatatggttaattgtgaccctgaggga
agattaatgattcacagtacaaaaatgtatccaacagaagactgtacattattcgttgtc
ttagggagagtaatgtcaggaacgcttgaagcaggtcaacgtgtacgcgttttaggagaa
gcatattcacgaacagatgaagaagattcacgagtgttaactgtcggtcgactatggatc
agtgaagcacgttattcaatcgaattgagtcgtgtacctgcaggaaattgggtactcata
gaaggaattgacaggccgatagtaaaaaccagtacaattaccgacctcaacaatacagac
gatctacatatcttccgtccgttaaaatttaatacccaaagtgttattaaaatagctgtt
gaaccagtcaatccatcggaacttccaaaaatgttggacggtttaagaaaagtgaacaaa
agttatccgctattaggaacacgcgtggaagaaagcggagaacacgttgtattgggaact
ggtgaattatatttggattgtgctatgcacgatttgcgccggatgtattctgagatagat
atcaaagttgctgatccggttgttgcatttgctgaaacagtagttgaaaccagttcgctc
aaatgtttcgcggaaactccgaacaagagaaataaactgacgatgatcgctgaaccactt
gaaagaggtcttgcggaagatatcgaagctgaacacgtcaaaattacttggaacaaaaaa
aaattgggagaatttttccaaacgaaatacgattgggatttgttagccgcgcgaagtata
tgggcctttggaccagatgcaacaggtcctaatattttggtagacgatactttaccatcc
gaagtggacaagagtttgttgagcagtgctcgtgatgctattattcaaggatttcaatgg
ggtacacgtgaaggaccactttgcgaagagcccattcgaaacgtcaaatttaaaatatta
gatgctgtaatagctcaagaaccattgcatcgaggaggtggtcaaattattccaaccgct
aggagagtcgcgtattcggcttttttgatggcaacaccaagattaatggaaccttatttc
tttgtcgaagttcaagcacctgccgattgcgtgtccgccgtttatactgttctagcaaaa
cgtcgaggtcacgttactcaagatgctcctgttccaggaagtccattgtatacaattaaa
gcttttattcctgcaatcgatagttttggttttgaaacagatttgcgaacgcatactcaa
ggccaagcattctgtttgtccgtttttcatcactggcaaattgtaccgggtgatcctctg
gataaaactattaccattagaccattagaaccacaacctgctacacatttagctagagaa
ttcatgttaaagacacgtagacgtaaaggtctctccgaagatgtttctatcaataaattc
ttcgacgatcctatgttgttggaattagcccgacaagacgtattattaaattatccgtta
taa
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