Pseudomonas chlororaphis PA23: EY04_08155
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Entry
EY04_08155 CDS
T03201
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pch
Pseudomonas chlororaphis PA23
Pathway
pch00020
Citrate cycle (TCA cycle)
pch00785
Lipoic acid metabolism
pch01100
Metabolic pathways
pch01110
Biosynthesis of secondary metabolites
pch01120
Microbial metabolism in diverse environments
pch01200
Carbon metabolism
pch01210
2-Oxocarboxylic acid metabolism
Module
pch_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pch_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pch00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EY04_08155
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EY04_08155
Enzymes [BR:
pch01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
EY04_08155
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Gene cluster
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Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AIC18870
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Position
1813514..1816345
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAYLSGSNAAYVEELYELYLHDPNAVPEEWRTYFQKLPTDGSTAIDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPTYSTDIKGHLLERVTAAEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDQTGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQYKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQIAKQRTTRELYADRLVQANVLDAERVQAKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTTFDLKTLQELSAKLLELPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYIPLQHLYDGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCMPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDAQDPKGVNRLVLCSGKVYYDLLEKR
RAEGRDDIAIVRIEQLYPFPEDDLNEVLAPYTNLKHVVWCQEEPMNQGAWYCSQHHMRRI
VGNHDKSLVLEYAGREASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcctacctatccggtagtaacgct
gcctatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacttacttccagaagttgcctaccgacggcagcactgccatcgatgtttcgcac
tcgacaatccgcgatcatttcgtgttgctggcaaagaaccagcgccgcgcccagccggta
tccgccggtagcgtgagcagcgagcacgagaagaagcaagttgaagtgctgcgattgatc
caggcctaccgtatgcgtggccaccaggcagcccagcttgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcaatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccatcggcgctgaatttacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgtgcgcggccgtccgacc
tactccacggatatcaagggtcacctgctcgagcgcgtcaccgcagctgaaggcctcgaa
aaatacctgggcaccaagtacccgggcaccaagcgtttcggcctggaaggcggcgaaagc
ctgatcccgatgctcgacgagctgatccagcgttccggttcctacggcaccaaggaagtc
gtgatcggcatggcccaccgtggtcgcctcaacgtcctggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaggtcgagctgggctccggtgac
gtgaaataccaccagggcttctcgtccaacgtgatgaccaccggcggtgaagttcacctg
gccatggccttcaacccgtcccacctggaaatcgtttcgccagtggtcgagggttcggtg
cgcgcccgccaggatcgtcgcaacgaccagaccggtgacaaggttctgccaatctccatc
cacggtgacgctgcattcgcaggtcaaggcgtggtgatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccgctggactcgcgttctaccgagtacgccaccgacgtcgcgaaaatg
atccaggcgccgatcctccatgtgaatggtgatgatccggaagccgtactgttcgtgacc
cagctggccatcgactaccgcatgcagtacaagcgcgatgtggtgatcgacctggtctgc
taccgtcgtcgcggccacaacgaagcggacgagccaagcggcacccagcctctgatgtac
cagcagatcgccaaacagcgcaccacccgtgagctgtatgccgatcgtctggtccaggcc
aacgtgctcgacgccgagcgtgttcaggcgaaagtcgacgaataccgcaacgcgctggac
aacggcctgcacgtcgtgaagagcctggtcaaagagccgaacaaagagctgttcgtggac
tggcgtccatatctgggccacgcctggactgcgcgtcacgacaccaccttcgatctgaag
accctgcaggaactgtccgccaagctgctggagctgccggaaggcttcgtggttcagcgc
caggtcgcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttatgccgaaaccatggcatacgcgaccctggcgttcgaaggtcacccgatccgc
atgaccggccaagatattggccgcggtacgttctcgcaccgtcacgcggttctgcacaac
cagaaagacgccagcacctacattccgctgcagcacctgtacgacggccagccacgtttc
gatctgtacgattcgttcctgtccgaagaagccgtactggcgttcgaatacggttactcg
accaccacgccaaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcccaggtggtgatcgaccagttcatcaccagtggcgagcacaagtggggccgtctctgc
ggtctgaccatgctgctgccgcacggttatgaaggtcagggtccggagcactcttcggct
cgtctggagcgttacctgcagttgtgcgccgagcacaacatccaggtctgcatgccgacc
accccggcccagatctaccacctgctgcgtcgtcaggtgattcgcccgctgcgcaagccg
ctggtggtcctgactccgaaatcgctgctgcgtcacaaactggccatctcgaccctggaa
gatctggcggaaggttcgttccagaccgttattccggaaatcgatgcccaggatccaaaa
ggcgtgaatcgtctggttctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgacgacatcgccatcgtgcgtatcgagcaactgtacccattccct
gaggacgacttgaacgaagtcctggctccgtacaccaacctcaaacatgtcgtttggtgt
caggaagagccgatgaaccaaggggcctggtactgcagccagcaccacatgcgccgcatc
gttggtaatcacgacaagtcgctcgtactcgagtacgcgggccgtgaagcctctgctgca
cctgcatgcggttacgcatcgatgcacgccgagcagcaggaaaaactgctgcaagatgct
ttcactgtttaa
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