Pseudomonas chlororaphis PA23: EY04_31680 Help Entry EY04_31680        CDS       T03201                                  Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pch  Pseudomonas chlororaphis PA23 Pathway pch03030   DNA replication pch03410   Base excision repair pch03420   Nucleotide excision repair pch03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pch00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     EY04_31680    03410 Base excision repair     EY04_31680    03420 Nucleotide excision repair     EY04_31680    03430 Mismatch repair     EY04_31680  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pch03032]     EY04_31680    03400 DNA repair and recombination proteins [BR:pch03400]     EY04_31680 Enzymes [BR:pch01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      EY04_31680 DNA replication proteins [BR:pch03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      EY04_31680 DNA repair and recombination proteins [BR:pch03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      EY04_31680    NER (nucleotide excision repair)     GGR (global genome repair) factors      EY04_31680    MMR (mismatch excision repair)     DNA ligase      EY04_31680   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       EY04_31680 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase RNA_ligase HHH_5 Motif Other DBs NCBI-ProteinID:  AIC23317 LinkDB All DBs Position complement(6925934..6927622) Genome browser AA seq 562 aa AA seqDB search MPNYRALPMAGLLLSAIALPSVASPCPDWTPAQAQAETATLQQHINRWDDSYHREGLSPV TDELYDQSRARLEHWQSCFPSVSAELANPLRTARGTVPHPIPHTGVEKLADESAVRRWFA GREEVWVQPKIDGVAVTLIYRQGRFQQAISRGDGLQGQDWTRPAQLISAIPKHLPEPRDL LLQGELYWRQHDHIQAKAGSLNARGQVAGLLARNQLDPQQASQIGLFVWDWPQGPSTLAQ RLDGLKALGFPHSSEYSQRVSTFAEVQHWRAHWYRSALPFASDGIVLRQSRRPEAQRWQA KAPYWIAAWKYPFAQALARVRKVDFKIGRTGRITPMLELEPVQLDDRQIRRVSVGSLPRW QELDIRPGDQVSISLAGLTIPRLDSVVLRASQRVPLQVPDASAFHALSCLQPLPGCKSQF LARLTWLSGKSGLDLPHVGTGTWEKLLDAGLINGLLDWLTLDPAELANITGLGERSIARL LGSLHSARQQPFQRWLKALGLPPTGNARLEDDWAVLAAITTEQWQAQSAIGPGRAAQLSA FFRDPQVLALIEELRAAGIEGF NT seq 1689 nt NT seq  +upstreamnt  +downstreamnt atgcccaactacagagcactgcccatggccggcctcctcctgagcgccatcgccctgccg agcgtcgccagcccgtgccccgactggacacccgcccaggcgcaagccgaaacggccacc ctgcaacagcacatcaaccgctgggacgacagctaccaccgcgaaggcctgtcgccggtg actgacgaactctacgaccagtcccgcgcccggctcgaacattggcaaagctgttttccc tccgtcagcgcggagctcgccaacccgttgcgcaccgcacgcggcactgtcccgcacccc attccccataccggcgtggagaaactggccgatgaaagcgccgtacgccggtggttcgcc gggcgcgaggaggtctgggtacagcccaagatcgacggcgtggccgtgaccctgatctat cgccagggacgcttccagcaagccatcagccgtggggatggccttcagggccaggactgg accaggcccgcgcaactgataagcgccatccccaaacacctgcccgagcctcgggacctg ctgctacaaggcgagctctattggcgccagcacgatcacatacaggccaaggccggcagc ctgaatgcccgcggccaggtcgccggcctattggcgcgcaaccagctggatccccagcaa gccagccagatcggccttttcgtctgggactggccccaaggcccgagcaccctggcgcag cgcctggacggtctcaaggccctggggtttccccacagtagcgaatacagccagcgcgtc agtacgttcgccgaggtccagcactggcgagcgcactggtatcgctcggccctgcccttc gccagcgatggcatcgtcctgcgccagagccggcgcccggaagcgcaacgctggcaggcc aaggcgccctactggatcgccgcgtggaagtacccgttcgcccaggccctggccagggtg cgcaaggtcgacttcaagatcggtcgcaccggccggatcaccccgatgctcgaactggag ccggtccagcttgacgaccggcagatcaggcgggtcagcgtcggctcgctaccgcgctgg caagaactggatatccgccctggcgatcaggtatcgatcagcctcgccggcctgaccatt ccgcgcctggacagcgtggtgctgcgcgcgtcccagcgtgttccgctgcaggtcccggac gcctcggccttccatgcgctcagttgcttgcagcccctgcccggctgcaagagccagttc ctcgcgcgcctgacctggctgagcggcaagtccgggctggacctgccccatgtgggcacc ggcacctgggagaagctgctggacgcagggctgatcaacgggctgctcgattggttgacc ctcgatcctgcagagcttgctaacattaccggccttggcgaacgcagcatcgcgcgtttg ctgggcagcctgcacagcgcccgccagcagccgtttcagcgctggctcaaagcccttggg ctgccaccgaccggcaacgccaggctcgaggatgactgggcggtgttggcggccataacc accgaacaatggcaggcccaaagcgctataggcccgggacgcgccgctcagttgagcgcc tttttccgcgatccgcaggtcctggccttgattgaagaattacgtgccgccggaatcgaa ggcttctga

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