Ectopseudomonas chengduensis: QYM18_11935
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Entry
QYM18_11935 CDS
T09586
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pche
Ectopseudomonas chengduensis
Pathway
pche01501
beta-Lactam resistance
pche01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pche00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
QYM18_11935
01503 Cationic antimicrobial peptide (CAMP) resistance
QYM18_11935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pche02000
]
QYM18_11935
01504 Antimicrobial resistance genes [BR:
pche01504
]
QYM18_11935
Transporters [BR:
pche02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
QYM18_11935
Antimicrobial resistance genes [BR:
pche01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
QYM18_11935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
PrgI_like
HEV_ORF1
Motif
Other DBs
NCBI-ProteinID:
WKC39777
LinkDB
All DBs
Position
2584070..2587207
Genome browser
AA seq
1045 aa
AA seq
DB search
MISRFFIDRPVFATVISIVIVLAGLAAMRALPIAQYPEILPPQVSVSAAYPGASSQVIAE
TVAAPLEQAINGVENMIYQLSNSSSSGAMSLTVYFAVGTDPDQATINVNNKVQAALAKLP
EEVRRQGVKVEKKSSDILQVITLYSPDDSRDPIFISNYALINVIDELKRLKGVGDASQFG
SKDYSMRIWLRPDKLAQYNLTPTDVVNAIREQNSQFAAGSFGQQPLKEPQDFTYTVTTQG
RFTDPKEFESVILRTDDTGASLLLKDVARVELGAQDYSLVTTLNGQQNAAFGIYLQPGAN
ALDTAEAVERTMQRLAKRFPEGIAYKIPYDTTKFVQVSITEVIHTFFEALVLVVLVVFIF
LQNWRATLIPVLAIPVSLVGTFAGMYMLGFSINLLTLFGMVLAIGIVVDDAIVVIENVER
VMRTQGLNAREASIKAMEEVTGPIIAIVLVLCAVFVPVGFLGGLAGQMYKQFAITIAVSV
VISGIVALTLSPALCALLLKPGHHEPAAPFRAFNRFFDKATEGYGAGVRFFLKRSLVGLL
LFGGMIALIMLLFSRVPGSLVPDEDQGYVINAYYLPPAASLNRTEALSGAVSQQLMEHPA
VEDVVTFAGFDVLTFGVRSNAGVSFVPLKDWSERTTPELDARNLTREFMGMGAAQKDGLV
LSFNPPPITGMSTTGGFESFIQDRSGGSVEQLGEKVQAFVEAASKRPELAGIQSTFSANV
PQYYIDLDRTKTRALGVSVSDVFTAMQATFGSYYVNDFTLYGRTWQVSLQSESEFRRKPE
DLGQVYVRSSSGDLVPLSTLLRVRRILGPDSYDRFNVYPSAKVLGGPAPGYSSGQALAAM
QEVADEVLGEDYSLGWIGSAYQELATQGSGTQAFVFGLILVFLILAAQYERWTLPLAVVT
AVPFAVFGAILAVWLRGIQNDVYFQVGLVTLIGLAAKNAILIVEFAVLLRAEGKGIFDSA
LEAAKLRFRPIVMTSLAFILGCVPLAISSGAGSASRHSIGTGVIGGMLAATLLATFLIPM
FYLLVESAAQRVSQRGKAREEQPPH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgcgcttcttcatcgaccgtccggtattcgccaccgtcatctccatcgtcatc
gtgctcgccggtctggctgcgatgcgcgcgttgcccatcgcccagtacccggaaatcctg
ccgccgcaggtgtcggtgagcgccgcataccctggcgccagttcgcaggtcatcgctgaa
accgtggcggcgccgctggagcaggcgatcaacggcgtcgagaacatgatctaccagctg
tccaactcttccagcagcggggcgatgagtctgacggtgtacttcgcggtcggcaccgac
ccggaccaggccaccatcaacgtcaacaacaaggtgcaggcggcattggccaagctgccc
gaggaagtgcgccgccagggcgtgaaggtggagaagaagtcgtccgacattctccaggta
atcacgctctattcgccggatgattcgcgcgacccgatcttcatcagcaactacgcgctg
atcaacgtcatcgacgagctcaagcgcctcaagggcgttggcgatgccagccagttcggt
tccaaggactattccatgcgcatctggctgcgcccggacaagctggcgcagtacaacctg
acaccaaccgatgtggtcaatgccattcgcgagcagaattcgcagttcgccgccggcagc
ttcggccagcaaccgttgaaggagccacaggacttcacttatacggtcaccacgcaagga
cgtttcaccgaccccaaggagttcgagagcgtcatcctgcgtaccgacgataccggtgcc
agtctgttgctcaaggacgtggcgcgggtcgagctgggcgcgcaggactactcgctggtc
accaccctcaatggccagcagaacgccgctttcggcatctacctgcagcccggcgccaac
gccctggacaccgccgaggcggtcgagcgcaccatgcagcgcctggccaaacgtttcccc
gaaggcatcgcctacaagatcccctacgacaccaccaagttcgttcaggtctcgatcaca
gaggtgatccacaccttcttcgaggcgctggtgctggtggtgctggtggtgttcatcttc
ctgcagaactggcgcgccacgctgattccggtgctggccattccggtgtcgctggttggc
acctttgccggcatgtacatgctgggcttctccatcaacctgctgaccctgttcggcatg
gtgctggccatcggcatcgtggtggacgatgccatcgtggtgatcgagaacgtcgagcgg
gtgatgcgcactcaggggctgaatgcgcgagaggcctcgatcaaggcgatggaggaggtc
accgggccgatcatcgccatcgtcctggtgctttgcgcggtgttcgtgccggtgggtttt
ctcggcggcctggcggggcagatgtacaagcagttcgcgatcaccatcgcggtgtctgtg
gtgatttccggcatcgtcgcgctgacgctttcccccgcgctctgcgcgctgctgctcaag
cccggccatcatgagccggcggcgccatttcgcgccttcaaccgtttcttcgacaaggcc
accgagggctacggcgccggggtgcgtttcttcctcaagcgttcgctggtcggcctgttg
ctgttcggcggcatgatcgcattgatcatgctgctgttttcacgggtgcccggctcgttg
gtgcccgatgaggatcagggctatgtgatcaacgcctactacctgccgccggccgcctcg
ctcaaccgcaccgaggcgctgagtggggcggtgagtcagcagctgatggagcatccggca
gtcgaagacgtagtgaccttcgccggtttcgacgtccttaccttcggcgtgcgcagcaac
gccggggtgtccttcgtgccgctcaaggactggagtgagcgcaccacgcccgagctcgat
gcacgcaatctgacgcgcgagttcatgggcatgggcgccgcgcagaaggatggcctggtg
ttgtcgttcaacccgccgccgatcaccggcatgagcaccaccggcggcttcgagtccttc
attcaggatcgttccggcggcagcgtcgagcagctcggcgagaaggtccaggctttcgtc
gaggccgccagcaagcgaccggagctggccggcattcagagcaccttcagcgccaacgtg
ccgcagtattacatcgacctggatcggaccaagacgcgggcactgggcgtcagcgtcagc
gacgtgttcaccgccatgcaggcaaccttcggcagttactacgtcaacgacttcaccctc
tacgggcgtacctggcaggtcagcctgcagtcggaatcggagttccgccgcaagccggaa
gatcttggccaggtctacgtacgctccagcagtggtgatctggtgccgctatcgaccctg
ttgcgtgtgcggcgcatcctcgggccggactcctatgaccgtttcaacgtctatccctcg
gccaaggtcctcggtggcccggcgccgggctacagctccgggcaggcactggcggcgatg
caggaagtggccgatgaggtgctgggcgaggactacagcctgggctggatcggctcggcc
taccaggaactggcgactcagggttcgggcacccaggccttcgtcttcggcctgattctg
gtcttcctgattctcgccgcgcagtacgagcgctggacgctgccactggcggtggtcacc
gccgtgccgtttgcggtgttcggggcgatactcgcggtgtggctgcgcggcattcagaac
gacgtgtacttccaggtcggcctggtcaccctgatcggcctggcggcgaagaatgccatc
ctgatcgtcgagttcgccgtgctgctgcgcgccgagggcaagggcatcttcgactcggcg
ctggaggcggccaagctgcgtttccgccccatcgtgatgacttcgctggcgttcattctc
ggttgcgtgccgctggccatcagctccggtgcgggctcggccagtcgccactccatcggc
accggggtgatcggcggcatgctcgcggccacgctgttggccactttcctcatcccgatg
ttctacctgctggtggaatcggcggcgcagcgggtgagccagcgcggcaaggccagggaa
gaacagccgccgcattga
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