Paenibacillus chitinolyticus: PC41400_28225
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Entry
PC41400_28225 CDS
T06610
Name
(GenBank) DNA-binding response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
pchi
Paenibacillus chitinolyticus
Pathway
pchi01502
Vancomycin resistance
pchi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pchi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PC41400_28225
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PC41400_28225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pchi02022
]
PC41400_28225
01504 Antimicrobial resistance genes [BR:
pchi01504
]
PC41400_28225
Two-component system [BR:
pchi02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
PC41400_28225
Antimicrobial resistance genes [BR:
pchi01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
PC41400_28225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
VpsR
OKR_DC_1_N
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QAV21345
UniProt:
A0A410X426
LinkDB
All DBs
Position
complement(6211748..6212443)
Genome browser
AA seq
231 aa
AA seq
DB search
MKRITILIADDEVEIADLIEMHLNKEGYDCVKAHNGHDALQAVQTHSIDLAILDIMMPKM
DGYEVTHQIREKHNMPIIFLSAKTTDLDKISGLVRGADDYITKPFNPMELVARVNAHLRR
FLQMNQAAAADKPILESGGLVIYPEQRTVSLYGNLIELTPKEFDILYLLARYPKKVFSVE
NIFQQVWGGAYYEGGNTVMVHIRTLRKKLGEDVSKNKLIKTIWGVGYTFNA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcatcaccatactgatcgccgatgatgaagtggaaattgcggatttaatagag
atgcatctgaataaagaaggatatgactgcgtgaaagcacataacgggcacgacgctcta
caagcggttcagacccattcgatagatttggcgattttggatattatgatgccgaaaatg
gacggttacgaagtgacgcaccaaatccgggagaaacacaatatgccgatcatttttttg
agcgccaaaacgacggacctcgataaaatttcgggtctcgtcagaggcgcggacgattat
atcacgaagccgtttaacccgatggaactggtcgcccgggtgaatgcccacctgcgccgg
tttctgcagatgaatcaggcggctgcagcagacaaaccgatcctggagtcggggggattg
gtgatatatccggagcagcgtaccgtcagcctgtacggaaatctgatcgagctaaccccg
aaggaattcgatattttgtaccttttggcgagatatccgaagaaagtgttcagcgtcgaa
aacatcttccagcaggtatggggaggcgcttactatgaaggagggaacacggtcatggtt
catatccgcactctccgcaaaaagctcggggaagatgtgagtaagaacaaattgattaaa
acgatctggggagtagggtacacgttcaatgcctaa
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