KEGG   Stutzerimonas chloritidismutans: LLJ08_08935
Entry
LLJ08_08935       CDS       T07923                                 
Name
(GenBank) BRCT domain-containing protein
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
pchl  Stutzerimonas chloritidismutans
Pathway
pchl03030  DNA replication
pchl03410  Base excision repair
pchl03420  Nucleotide excision repair
pchl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pchl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LLJ08_08935
   03410 Base excision repair
    LLJ08_08935
   03420 Nucleotide excision repair
    LLJ08_08935
   03430 Mismatch repair
    LLJ08_08935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pchl03032]
    LLJ08_08935
   03400 DNA repair and recombination proteins [BR:pchl03400]
    LLJ08_08935
Enzymes [BR:pchl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     LLJ08_08935
DNA replication proteins [BR:pchl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LLJ08_08935
DNA repair and recombination proteins [BR:pchl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     LLJ08_08935
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LLJ08_08935
   MMR (mismatch excision repair)
    DNA ligase
     LLJ08_08935
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LLJ08_08935
SSDB
Motif
Pfam: BRCT PTCB-BRCT
Other DBs
NCBI-ProteinID: UEG63238
LinkDB
Position
complement(1895015..1896358)
AA seq 447 aa
MDDPMSSLYLNLYVHSDAAITQAAIRQFVTHVNADDYAAVEAMDVEDSLYEIDDILSSAI
ELHQDKGLFHLVFESTSSLEVEVLVNFFHNLGADSIEISAFSSSTGETFYVNNEGEYLED
YADSSWQWLPSPASGFIGQFVVVTGTFSDYTRPEVEELIGQKGGKIQKSVNSKTTLLVIG
ARPGADKTGKAETLGIRTMDEEELLDVLAGGDTLSVNGESLETESIDQPIIAYQYCFPPK
DASVTTLPIAVREDLIALLRANNYLNEQYYKTKLSHARNWHPHIAGKFNEYRHAREIPME
ARGPLEPRSAWDIANIFSDHNTLITGYAPYIFQADQKGYGHALAQIAKFSGMPLEEIQYT
PKAGTKDSFTLSCKFEGKTYRASFKFSKDTFPKAFLRLLHDIAAQSTSWDFVFHTRRGDN
GYVLVPSALAQGLAHHGFLKPLYMCAL
NT seq 1344 nt   +upstreamnt  +downstreamnt
atggacgaccctatgtcatcactttatttaaatctttacgtacattcagacgcagccatc
actcaggcggccattcgccagttcgtcactcacgtaaatgctgatgactatgcggctgtt
gaggctatggatgttgaagattctctttatgagatagatgacatactgtcttctgctatc
gagttgcatcaagataaaggtctcttccatttggttttcgaatcgaccagctcccttgag
gtcgaagtgctggtgaatttctttcacaacctcggcgctgacagtatagaaatcagcgcc
ttcagttccagcacaggggagaccttctatgtgaataatgaaggtgagtacctagaagac
tatgccgacagctcgtggcaatggcttccctcaccagcttcaggtttcatcggtcagttc
gtggtggtgactggaaccttttccgactacacccgaccagaggtggaagagctgatcggc
cagaaaggcggcaagattcagaagtcagtcaacagtaaaaccacgcttttggtgattggt
gcaagacccggcgctgacaaaactggcaaagctgaaacgctcggcatccggacgatggac
gaagaagagttgctcgatgtactcgctggtggcgatacgctctcggtcaatggtgaatcc
ttagagactgaatcgattgaccagccgatcattgcttaccagtactgcttcccaccaaag
gacgcatcggtcaccacgctacccatcgccgttcgcgaggatctcattgcgttgttacgc
gcgaataattacctcaacgagcagtactataaaactaaactttctcatgcgcgaaattgg
catcctcatatagctggcaaattcaatgaatatcgccatgctcgtgaaattcccatggag
gctcgcggccctctcgaaccgcgatctgcctgggatattgcgaacatttttagcgaccac
aatacgctgatcaccggttatgccccttacattttccaggctgaccaaaaggggtatggt
catgcgcttgcccaaatagctaaattctcaggcatgccgctggaggaaattcagtacacg
cccaaggcggggacaaaagacagcttcaccttgtcctgtaagtttgaagggaagacctac
agggcttcgttcaagttctcaaaggacacgttcccaaaggcattcttgcgtctgctgcac
gacatcgctgcacaaagtacctcatgggacttcgtctttcacactcggcgaggtgacaat
gggtacgtgcttgtacctagcgcgttggcacaaggcctcgctcatcatggtttcctaaag
ccgctgtacatgtgcgctctatga

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