KEGG   Pochonia chlamydosporia: VFPPC_00633
Entry
VFPPC_00633       CDS       T09407                                 
Name
(RefSeq) LSM domain-containing protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VFPPC_00633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pchm03019]
    VFPPC_00633
   03041 Spliceosome [BR:pchm03041]
    VFPPC_00633
   03032 DNA replication proteins [BR:pchm03032]
    VFPPC_00633
Messenger RNA biogenesis [BR:pchm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     VFPPC_00633
Spliceosome [BR:pchm03041]
 Complex A
  U1 snRNP components
   Sm proteins
    VFPPC_00633
  U2 snRNP components
    VFPPC_00633
 Complex B
  U1 snRNP components
    VFPPC_00633
  U4/U6.U5 tri-snRNP components
    VFPPC_00633
 Complex C
  U2 snRNP components
    VFPPC_00633
DNA replication proteins [BR:pchm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     VFPPC_00633
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 28844607
NCBI-ProteinID: XP_018148822
UniProt: A0A179G6F0
LinkDB
Position
1:complement(2523814..2524771)
AA seq 207 aa
MSNKQGKMAGYINWRMRVTLNDGRAMTGQMLAFDKHMNLVLADTEEFRRVKRKAKSTAPG
ASSQVVETEEKRTLGLTIVRGAHIISLSVESPPPADPSARLGKSAPSGIPSSLTAGPGVA
KPAGRGAPAPSLAGPAAGVGGGVPPPGFPGFPGAPGFPGAGRGAPPPGFPGGFPPPPGGF
PGSAQFPPPGFNPPGGGPPGFNPPPRR
NT seq 624 nt   +upstreamnt  +downstreamnt
atgtcgaacaaacaaggaaagatggccggttatatcaactggcgtatgcgcgtcaccctg
aacgacggacgtgccatgaccggccagatgcttgcatttgataagcacatgaatcttgtt
ctcgccgataccgaagaattcagacgcgtaaagagaaaggccaagtcaaccgcgccgggc
gcatcatcccaggttgtcgagacggaagaaaagagaactctcggtctgaccattgttcgc
ggcgctcacatcatctccctctccgtcgaatcgcctcctcccgccgaccccagtgctaga
cttggaaagagtgctcccagtggtattccatcctctctcaccgccggacccggagtcgcc
aaacctgctggccgtggtgcccctgctccatctttggctggtcccgctgctggagttggc
ggtggcgtgcctcccccgggcttccccggtttcccaggagctcctggctttcctggtgcc
ggacgaggtgctcctccccccggtttccccggaggcttccctcctccacctggaggattc
cctggaagcgcgcaattccctccccccggctttaacccgcctggtggcggcccccctgga
ttcaaccctcccccacgaagatag

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