Pochonia chlamydosporia: VFPPC_06586
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Entry
VFPPC_06586 CDS
T09407
Name
(RefSeq) isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VFPPC_06586
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pchm01007
]
VFPPC_06586
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchm03016
]
VFPPC_06586
Enzymes [BR:
pchm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
VFPPC_06586
Amino acid related enzymes [BR:
pchm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
VFPPC_06586
Transfer RNA biogenesis [BR:
pchm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VFPPC_06586
Prokaryotic type
Other AARSs
VFPPC_06586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
28849590
NCBI-ProteinID:
XP_018138324
UniProt:
A0A179F4U6
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MSISFPKTEEETLRFWRDIDAFHTQLKLTQDGPRFTFYDGPPFATGLPHYGHLLASTIKD
IIPRYWSMKGYHVVRRFGWDTHGLPVEHEINKKLQISSGEAVMQMGIEKYNAECRAIVMK
YSGEWRQVIERLGRWIDFDNDYKSMDVTFMESCWWVFKQLFENGHVYRAYQIMPFSTALG
TPLSHMEERQNEKSTVDPAVVVAFPILNVDGQENTSLLIYTTTPWTLPSNLLIAVNPSFE
YIQISDEKSGDGFILLESCLSVLYKNVKNAKYKVIKKVPGKEMIGWRYKPIYDFFTEKFP
DCFQVIGADYVESGEGTGLVHQAPAFGQEDYDAAVAAGFISKERLPPCPVDDKGCFTQEV
PTYKGQHVKAADKAIIRDLRPTGRLLVETQVTHTDKFCPRSQTQLIRKAVSAWFIKVTNS
TPEMLKNLEETTWVPQFVKDKRFANWVSNARDWNVSRNRYWGTPIPLWVSEDFEEVVCVG
SREELRSLSAYDGPLDDIHRDKIDYITIPSQQGKGVLRRIDEIFDCWFESGSMPYASNHY
PFENKDDFQKGFFPADFIAEGLDQTRGWFYTLSVLGNKLFGKSPFKNCIVNGLVLAEDGK
KMSKSLKNYPDPAHVLDNYGSDALRLYLINSPVVRAEPLRFNEAGVKEIVGRVLLPLWNS
YRFFSEQAMLFSNTTDTKFVAVSSVCSHDNITNVMDRWVLADCQSLLRFMDREMAGYRLY
TVVPRLLQGIDNLTNWYIRFNRKRLKGTAGLSLDDTTAALNTLFQVLFTITRAMAPFAPF
ITEHIYGLLKPYLGDTLTSVSDMSSVHFLPFPTVREELIDTTIERKMSAMQRVIKLARTA
RERRSISLKTPLKSLVVIGDPQFISDIDTLMSYITEEINVNEVVLTSDEERYGIHLEAKV
DWPSLGKKLKRDVQVVRKALPSLTQEELRQYQREKHIVVSGIHLAENDISIVRVMPARSA
DATTEGGPSWEPSFDEHVVVLLDGASYAELEFDGLARDLVTRFQKLRKKAKLVPLDDVRM
QYSVVANPEGIDVDALMSSKQPLFTSALRGQLNNLTTDGYEDVLIEEDQFIGALTLRLRL
SRI
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcagcttccccaagactgaggaggaaacccttcgattttggagggatattgat
gcatttcatactcagctcaaactaacccaggacggcccccgcttcactttttatgatggc
ccgccatttgcgaccgggcttccccattatggccaccttctggcatccaccatcaaagat
attataccacgatactggtcgatgaaaggctaccatgtggtccgtaggtttggatgggat
actcatggcttaccggtcgagcacgaaatcaataaaaagttacaaatttcgagtggcgaa
gcggttatgcagatgggcatcgaaaagtataatgctgaatgcagggccatcgttatgaaa
tactctggcgagtggcgacaagtcattgagcgattagggagatggattgacttcgataac
gactacaagtccatggacgtcactttcatggagtcttgttggtgggttttcaagcaactt
ttcgagaatggtcacgtctaccgcgcctaccaaattatgccattttcgactgcactcggc
acaccactcagccatatggaggaaaggcagaacgagaaatctacagttgatcctgccgtt
gtagtagcattccctattctgaacgtcgacggtcaagaaaatacttcgctacttatttac
acgacaaccccatggactttgccgtcaaacttactcattgcagttaacccatctttcgaa
tacattcagatatcggacgaaaaatcgggcgatggcttcatacttttagagagctgcctg
tctgttttgtacaaaaatgtgaagaacgccaagtacaaggtgatcaagaaagtgccgggg
aaagaaatgatagggtggagatacaagcctatttatgattttttcacagaaaaatttcca
gactgttttcaagtcatcggtgcagactacgtggaaagtggggaaggcactggtctggtt
catcaagcgccagcttttggacaggaagactacgatgccgctgtcgcagctggttttatt
tccaaagagcgcttgccaccgtgtcccgtcgacgacaagggctgctttacccaagaagtc
ccaacttacaaaggtcagcatgtgaaagcagcggacaaggctatcatcagggatttaagg
ccaaccggtagactattggtcgagacacaagtcacacacactgataagttttgcccgcga
tcccaaactcagcttattaggaaggctgtttcggcctggttcatcaaggtcacgaactcg
acacctgagatgctaaaaaatttggaagaaacaacttgggtaccacaatttgtcaaagac
aagcgcttcgcaaattgggtttccaacgcacgcgattggaatgtctcccggaatcgttat
tggggaacgcccattcctctctgggtcagcgaagactttgaagaggttgtgtgtgtaggg
agcagagaggagctcagaagcctgagtgcgtacgatgggcctttggatgacattcacaga
gataagattgactatataacaattccatcacagcaaggcaaaggagtcctgcgcaggatt
gatgaaattttcgattgctggtttgaatctggaagcatgccttacgcgtccaaccactat
ccattcgaaaataaggatgacttccagaaaggattctttccagccgatttcattgcagaa
gggctagaccaaacacgtggctggttctacactctaagcgtgctcgggaataagcttttc
ggaaaatcaccgttcaaaaattgtattgtaaacgggttggttttggccgaagacggaaag
aagatgtcaaagagccttaagaactatccagaccccgcacatgtcctcgacaactacggc
tctgatgccctgcgactttatttaataaactccccggttgtcagggctgagcctctgcgt
ttcaatgaagctggagtcaaagaaattgttggtcgtgtcctgctcccgctatggaacagc
taccgtttcttctcagaacaagccatgctctttagcaatacaaccgacaccaagtttgtc
gctgtctcatctgtttgttctcacgacaatattaccaatgtgatggaccgatgggttctc
gcggactgccaaagcctcttgcgcttcatggaccgggaaatggctggctatcgcttatat
actgtcgttccgcgattactgcaagggattgacaatcttacaaattggtacatacgattc
aatcgcaaacgacttaaaggaaccgcaggcttgagcttagatgacacgacagccgcgctg
aatacgcttttccaggttcttttcacgataactcgtgcaatggccccatttgcccccttt
ataacagagcatatctatggtctgttgaagccatatctaggtgacacccttacaagtgta
agcgacatgtcaagcgttcacttccttccctttccgaccgtgcgggaggaactcatagac
accacgatcgagaggaagatgtctgcaatgcagagagtcatcaaattggcgagaacagct
cgagagcggcgctccatcagcctcaagacccccctcaaatctttggtggtgatcggcgat
cctcagttcatctcagatattgacaccttgatgtcttacataactgaagaaataaatgtc
aatgaggttgtcttgacaagcgacgaagagagatatggcatccacctggaggccaaagtg
gattggccaagtttgggtaaaaaattgaagcgtgatgttcaggttgttcgaaaggcattg
cctagcctgacgcaggaagagctaaggcagtatcaacgcgagaaacacattgtggttagc
ggtattcacctcgccgagaacgacataagcattgtgagggtgatgcctgccagaagtgcg
gatgccacgaccgaaggtggcccaagctgggaaccatccttcgatgagcacgtggtggtg
ctcttggatggtgcttcgtatgcagaactggagtttgatggtttggcccgtgacctcgtc
actcggtttcagaagcttcgaaagaaggccaaattggtaccattggatgacgtcagaatg
caatacagcgttgttgccaacccggaagggatcgatgtggatgctctgatgtcgtccaaa
cagcccctcttcacgagtgctctccgtggacaacttaacaatctgacaacagatggatat
gaagatgttcttattgaagaggatcagtttattggcgctctgactttgcgactccgtctc
agtcgcatatag
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integrated database retrieval system
