Penaeus chinensis (fleshy prawn): 125035846
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Entry
125035846 CDS
T08118
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pchn
Penaeus chinensis (fleshy prawn)
Pathway
pchn04120
Ubiquitin mediated proteolysis
pchn04140
Autophagy - animal
pchn04144
Endocytosis
pchn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125035846
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125035846
04140 Autophagy - animal
125035846
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125035846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125035846
04121 Ubiquitin system [BR:
pchn04121
]
125035846
Enzymes [BR:
pchn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125035846
Membrane trafficking [BR:
pchn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
125035846
Ubiquitin system [BR:
pchn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125035846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
Sina_ZnF
zf-TRAF_2
RING_XB3-XBAT31
zf-RING_6
zf-Nse
DUF5740
Motif
Other DBs
NCBI-GeneID:
125035846
NCBI-ProteinID:
XP_047484086
LinkDB
All DBs
Position
20:14441447..14452277
Genome browser
AA seq
594 aa
AA seq
DB search
MESVEESITILSRQEGFDYEFVPPLDPKYECAICLLGLRSPIQTTCGHRFCKDCIFNCMS
ESSSRCPVDNTPLTEVDLFPDSCAEREILQLSVKCPNHGLGCRRTVDLMYIEHHTQACSF
QPVMCPNECSATVLRKEVEQHLSSECVLRVKKCALCEQPFTFNQEQLHLLSCVRVTVPCE
MCGAMMPRGEVAGHMTETCPKVVVACTFAEHGCHHKMTRADLKQHMLQATQLHLQLLSSA
YKKINTFVSDLSRTVGLIQSPFGNFSRQPSLRSQISATSPIPENHTSPSLPERTLEKSLG
ATGGTVGCSEKSGVFSSPQSGDKGGADSGIELNKLHLQLNQVSIEGVSKSPSSKSLSTVS
HQEIIIRDLCEKSVDLNQRMLEETIKLSNLAKRIEEVDALVEAQLMEMSGKYCNGDYVWR
IKNFSQFCAELQNKPGRVCHSPSFYTSQFGYKFCLRTNITWKSEQYFLTLFIHGMQSEND
DFLDWPFSGRITLSVLDCDTSLPKNHITETMVTKPGLQAFKRPDVARNPKGFGFTEFVPL
AKILQPSIGTFLKNDTLCIRATVCPNTWNHESSQSMEKLGIFKEKLHIEKQSCV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgtcgaagagtccatcacaattttgtctcgtcaggagggatttgattatgaa
tttgtccctccacttgaccccaagtatgagtgtgccatatgtctattgggattgcgctca
cccatacaaactacatgtggtcaccgcttttgtaaagactgtatcttcaactgtatgagt
gagagcagtagccgctgtccagttgataatactcccctcacagaagttgatttattccct
gactcatgtgctgaacgtgagatattgcagcttagtgttaaatgtccaaatcatggcttg
ggctgtaggcgaacagttgacttgatgtatatagagcatcatactcaagcttgttcattt
cagccagtcatgtgccctaatgaatgctcagcaacagtgttacggaaagaagtggaacag
catcttagttcagaatgtgtcctgcgggtaaagaaatgtgctctctgcgagcagcctttc
actttcaatcaggagcaactgcatttattaagttgtgtgcgtgtgacagtcccatgtgag
atgtgtggagctatgatgccacgtggggaggttgcaggacacatgacagagacatgccca
aaggtggtagtggcatgcacttttgctgaacatggctgccatcacaagatgactcgagct
gatttaaagcaacatatgttgcaagcgacgcagctacatctgcagcttctgtcttcagca
tacaagaagatcaacacctttgtgtcagatcttagtcgtacagtaggtctcattcagtct
ccgtttggaaacttcagtcgacagccaagtttacgcagccagatatcagcaacatcaccc
attccagagaatcacacaagtccatcacttccagaaagaactctagaaaagtccttaggt
gcaactggagggacagtaggctgtagtgagaaatcaggtgtcttttcctctcctcagtct
ggggacaaaggcggtgctgactcaggtattgaactgaacaagcttcacctacagctgaac
caagtgagtatagaaggagtaagcaagagtccatcttctaagtctttgtccactgtgtct
catcaggaaattattataagggatctatgtgagaagagcgtagatttgaatcagaggatg
cttgaagaaaccatcaaattaagtaatttagctaaaagaattgaagaagttgatgccctt
gtcgaagctcagctaatggaaatgagtggaaaatattgtaatggtgattatgtttggaga
atcaaaaatttctcccaattttgtgccgaattacagaataaaccaggaagagtatgtcac
agcccatcattctacacatcacaatttggatacaagttttgtcttcgaacaaatatcaca
tggaaatctgaacagtattttttaactctatttattcatggaatgcaaagtgagaatgat
gacttccttgactggccctttagtggacgcataactctttctgtactagactgtgataca
tcattacctaaaaaccatatcacagagaccatggtgactaaaccaggtctgcaggctttc
aagcgtcctgatgttgctcgtaatccaaaaggatttggatttacagaatttgtacccctt
gcaaaaatacttcaacccagcataggaactttcctcaaaaatgatactctctgcattaga
gcaactgtttgccctaacacttggaaccatgagagtagtcaaagcatggaaaaacttgga
atattcaaagagaagcttcatattgagaagcaaagctgtgtgtga
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