Penaeus chinensis (fleshy prawn): 125046619
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Entry
125046619 CDS
T08118
Name
(RefSeq) lysosomal-trafficking regulator-like isoform X1
KO
K22937
lysosomal-trafficking regulator
Organism
pchn
Penaeus chinensis (fleshy prawn)
Brite
KEGG Orthology (KO) [BR:
pchn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchn04131
]
125046619
Membrane trafficking [BR:
pchn04131
]
Endosome - Lysosome transport
Others
Others
125046619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
PH_BEACH
NBCH_WD40
Beta-prop_EML
WD40_CDC20-Fz
WD40
WD40_Prp19
GST_C_5
DUF4800
Motif
Other DBs
NCBI-GeneID:
125046619
NCBI-ProteinID:
XP_047500403
LinkDB
All DBs
Position
39:3300439..3391531
Genome browser
AA seq
2873 aa
AA seq
DB search
MHSLLTFVIVTYPYAGLHVDTLLNELRSPLLRYSPRTCGDVKHLVSVMLQCCVLSSSTSI
TYSLPHTTQALEMLDEEPGPAGGEGEQHPGETDGYEADTEQLANNTYPSSARSWQQDDNL
ECPELVLLALDLIINHHEKFLETREEAQEEVGTGPENHDKQEKHMPESPLKKRGQNRRRW
SRRRRLKDGSKSPSKGSGARSASGDKSTSSASSVYHSMTSDDDTGSDTGNSDGTEWANEP
KPEILESEKVQVKPGLSVSVSVENDSCVENACSTNSFENVSSQSANDYKTRAQGAMIQST
SQDESLSKGMSWSSGEATSPQHTVHTGSYSTCCESEMTHSASLTQCVHALLLLCRSSANV
CRRLHALGFLTSLLNGFTDLICANSVIYQDVVGTVVGVWAEVGRWSLTPTELSQFLALFK
APNPPLETLLRALSGVLEGSGREPQHALPYPCPGASPTSVSPALDASHNSLTESLASFVN
IRVPSSPVVEAITRLHESHCRHGILSCAAISCVVCPVPRTLDWSPYNSGLSSTSWVCIRD
RTGAESKQRCSPQSSLVMSYGSGSYFENAARCNSNFSRGATSTVSVSSEVTLNKLHILSV
GTQHLMFSLWLDPVKDCLQVCISREVDGESVLLSQGVVVRAGICDGDWHHLAFCVPTINV
RRGGSLKVTIFLDSLTCHSVTLMVPPVGSIKKSSPSYLLLGHTDYYSAEGPQMCQSVDEL
DPLSLHRTRRGSLCYSHSHKLLMANTFLFREPILSRELCLYLIALGKDCTSLLPLTSKDE
RVLLMPFITPKLLTTGMDLSVIYGRMESVIRPAQECLLLLHSAQEPSEFLCYKPHVPTLQ
DFGTHYPTCSTQTAVMFGDLNPVRNQGPDLALLQMGGIAHLVYLCARMVEVKGEEREQAE
ALTLLLQAVHTSPHLAAQYAGIRGNSLIFRILMSPLASPGVQVIKALLDGCTYPSVVQYL
ACRDVYTIAPHVPAMLVDRDLMDSLISNWKTFLGNCSEKQTTKYCVDENGERISVLGILL
SVLKVLVAENQPYRDFNLSQLRDIDALDKILFMCKELELTTGSLDGLCSADLVVSVVTGL
VGGLGPGSWRNAATGHTHGFSAQDSYSSGFCSGPSGVGMAATPTGITSFGIGSPGVRVRD
VAAVYGFLLLSHPAHLTYAATEQHTAYYLPQVPSSTNSRQGSLVAIGVDLAAEINDVPRP
SQESQRQTGDWIVIGTKDPVLKPQSVKSSQKKREPESPNKSTSPSSGEEENTDVVDSVSN
SETASDATMPEVEDQVDGEVIREIETALSAVIPVGEVALAKEEEEQDVDDGSCLTKAKSK
DIEVEVGEEKSEKEAETSDEQSQYSSPDESSRSEETETDDRILGKTSRWTEEVMDTDEDD
SDEEDESIDNDDHSCLTQVVVGLLEMLEMVLKYSSDTTTRTLLAEALFMDQVLIMCNHPQ
PIIRCSVFKLFTVILDRCSPEDMVMHLRQNVPLVMAQQLHKHSTISTQLVTAAFSLALGR
SFTFEDYAIDSDPSLALPNQVVLFIPLMALLPHSAQDIALCHNSLMVLLDLLHKNTELII
PLIHKAHFVDSLLSTMKKSLHDNNLGINDITGESECEVVVSDITEIFSWIINCLVASPQH
KHFMLSLEVLHQLNLLCRGEAAQCGGQASCVGHLRSTEAALLQVALTRIQATASTHLHSI
GQDLSNSIREEKTFGISGSSSLHNIKLFATMAARDDSDSGVGSVLANYTTIPLTHSLHNI
ADQLFMSQSRSSPSLVLSNAKKEDKVLAHSEIVDRFKVLLQKATDFVFMSAWSSVESVGN
EMPSGGAPETFSLFLLELLLSAAATITQRKGTADRTGWERVVWGCQDILRLHLTHLLALV
TSPRTHIHTRLRAAQSLATHSRIQPVLSYANKANPQLLYKVGIFMHELRYQNENKLDGAA
VKCCEMVLQILEDCTVHVLPPPELYPPHGAMKEWSVVIEEKKQWQDEAAKIAALIVDRCT
KQDKRLLTKNSQVYESVAGECSRLTRTVVDRQNVERKVVLGGIKHSQCRHVHLTHRWRSL
IDLLTHERATWHFPEAYPRSWQLDQTEGPMRVRKRLKRGRLNIQPRYLMPEYRQKLDIEN
KLAPLEAVLQGSETESAMAVMIERLNVSERIIHMSSASVVSPGMEQRGEILISRTAMYFV
GEQVTIDMNQCGSSSEVVSVTWPLDNIREIHIRRFQLQDCALEVFLTTGHSVLLAFTDTQ
HRNQVIGILSTSDLPNLSSKATLPEVTTQWREGHITNYEYLTQLNKLAGRSFNDLMQYPV
FPFILSNYIVEILNLNDPAVYRNLKKPIAVQHKHKEQHYINNYEITRQMSQNAGDGPYHY
GSHYSNSGIVLHFLVRLPPFTQLFLRYQDGNFDIPDRTFHAVQTSWRLASCDSTTDFKEL
IPEFFFLPEIFLNSEGFNFGVRQSGERVHHVHLPPWSGDDPRRFVLVHRAALESPYVTQN
LHHWIDLVFGHKQTGRAAVEAINVFHPATYFGYDVESGGDEIGREARKAMIKTYGQTPQQ
LFSHPHPPVSNAGFAQNPQAPEVLHEVRGLRWGSYAGSPADDRPILALVQLLKTPAAYVT
SISGTELLLMPPHTHLVTAGVEKGLIWAGTTSAYIVSSHHKDGIIRCRRHKDTLSQPLIA
VPPFDKVMWCSSGSGQVWVGLASGQILVYQVSPYHAGGDLKATLTPTTLLAHTAPIMHMY
VSEAFSVCVSGGKDGMCVLWDTNRLSYIRSIGSSGVEVSLLAMSETLGDWASVSPLGSAA
SVLRLYTINGALVDSVVTPAPVTAITFSSAPEGTAVNVIATSLADGIIRLWSVWDLRPVR
ELRTDRARQPIISLHYTRDNHHLCGITETGVLLVWESSLVKTKMPKFITVPAI
NT seq
8622 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgctgctcaccttcgtcattgtaacttacccatatgcaggtttgcatgtggat
acacttttgaatgagttgaggtcgccattgttacgttactcaccccgtacttgtggggat
gtgaaacacctcgtgtctgtcatgctacagtgttgtgtgttgtcctcatcaaccagcata
acttattctttacctcacacaacacaggcccttgagatgcttgatgaggagccaggtcct
gctgggggggaaggagagcaacatccaggtgagactgatggctatgaagcagacacagag
cagcttgccaacaacacctatccttcatcagctagatcttggcaacaggatgacaatttg
gagtgccctgagctggtactgttggcactggacctcattatcaaccaccatgagaagttc
cttgagacacgagaggaagctcaggaagaggtgggaactgggcctgaaaaccacgataag
caggagaaacacatgcctgagtcccccttgaagaagaggggtcaaaaccgaaggcgctgg
agcagaaggaggaggctcaaggatggatccaaatccccctcaaaagggtccggagctcgc
agtgcatcaggcgacaagagcacatcctcagcctcctcggtgtaccacagcatgacctca
gatgacgatacgggttcggacacggggaactctgatgggactgagtgggctaatgaacca
aagccagagattcttgagagtgagaaagtgcaggtgaaaccagggctaagtgtaagtgtt
agtgtagaaaatgattcatgtgtagaaaatgcttgttcaaccaactcctttgagaatgtc
tcctcacaatctgcaaatgactacaagacaagggctcagggtgccatgatccagtccacc
tcccaggacgagtcgctctcaaagggcatgtcctggtcgtctggcgaggcaacttcccca
cagcacacagtccacacagggtcatactcaacctgttgtgagagtgagatgactcacagt
gcctcccttactcaatgtgtccatgccctcctcctcctctgccgctcatctgccaatgtg
tgtcgtaggctccatgccctgggcttcctcacaagcctcctcaatggatttactgatctc
atctgtgccaacagtgtgatatatcaagatgtggtcggaacggtggtgggcgtgtgggcg
gaggttggccgctggagtctcacgcccacggaattgtctcagttcctggctctgttcaag
gcaccgaacccgccccttgaaacgcttctgcgcgccctttctggggtccttgagggtagc
gggcgcgagccgcagcacgccctcccgtacccgtgcccgggggcgtccccgacctcggtg
tcgccggccctcgacgcctcgcacaactccctcaccgagagcctggcatccttcgtcaac
atccgggtcccgtcgtcgcccgtcgtcgaggccatcaccaggctgcacgagagccactgc
aggcacgggatcctgtcttgcgctgccatctcctgtgtggtgtgtcccgttccacgcacc
ctagactggtccccctataactcaggcctctcaagcacatcgtgggtgtgcatccgtgac
aggactggggcagagtcaaagcaacgatgctctccacagtcgagcttagtcatgagctac
gggtctggaagttactttgagaatgccgctcgatgtaattccaatttctcacggggagcc
acgtctacggtatctgtgagcagtgaagtaaccctgaacaagctgcacatcttgtcagtg
gggacgcagcaccttatgttctcactgtggctggatcctgtcaaagattgtttacaagtg
tgcatttcacgagaagttgatggagagagtgtgctcctaagccaaggtgttgtggtccgg
gcaggaatatgtgatggagattggcatcaccttgccttttgtgttcctacaatcaatgtt
cgcagaggcgggtctttaaaggtaacaatattcctggactccttgacatgccattcagtg
actctgatggtacctcctgttggctccatcaagaaaagttcaccatcataccttttactt
ggacacacagactattattcagctgagggtcctcagatgtgccagtcagtggatgaactg
gaccccctcagcctgcacaggacacgaagagggagtctgtgctacagtcattcccataaa
cttctcatggccaatacattcctatttcgtgagcctattttgagccgtgaattgtgtctt
tatctcatcgccctcggaaaggactgtacgagtctgctcccacttacttccaaggacgaa
agagtattgctgatgcccttcatcacacccaagcttctgacaacaggcatggacctctct
gtgatatatggacgtatggagtctgtgataagaccagcgcaggagtgcttattgctcctc
cactctgctcaggagccttcagagttcttgtgctataagccacatgttcctacactgcaa
gacttcgggacccactacccaacatgttccacacaaacagctgtcatgtttggtgatttg
aaccctgtgagaaatcaaggcccggatttagcactgttgcagatgggtgggatagcccat
cttgtctatctgtgtgcaaggatggttgaagtgaagggagaagaaagagaacaagctgag
gctctcacacttctcttgcaagcagttcacacttctcctcacttggctgcccagtacgcg
gggatccgaggcaattctctcatcttccgcattctgatgtctccccttgcatctccaggg
gtgcaggtcattaaggctctgcttgatggttgtacttatccgagtgtcgtgcagtactta
gcatgccgtgatgtgtacaccatcgccccacatgtaccagcaatgctagttgacagggac
cttatggattcactcattagcaactggaagactttccttgggaattgttctgagaaacag
acaacaaagtattgtgtggatgagaatggggaaaggataagtgtactaggtatattgctg
tcggtgctgaaggtgctggtggcggaaaaccaaccatatcgagactttaatctctctcag
ttgagggacattgatgctttggacaagattctcttcatgtgcaaggaactagagctaaca
acaggttctctggatggcctgtgttcagctgacttggtggtaagtgttgtaacaggtctg
gtaggaggtctgggacctgggtcttggagaaatgcagccacaggtcacacacatgggttt
tctgcccaggactcgtattcctcaggcttttgctcaggtccttcgggagttggcatggca
gctacgcccacagggattacctcatttgggattgggtcacctggagtccgtgtgagagat
gtggcagctgtttatggtttcttgttgctatcacatcctgcccaccttacttacgcagct
acagagcagcatactgcatactatttaccacaagttccatcttcaaccaatagtagacaa
ggatcccttgtggctattggggtcgatttggcagctgagataaatgacgttcctaggcca
agtcaggaaagccaacgccagaccggtgattggattgtgattggcactaaagatccagtg
ctgaagccacaatcagtaaagagcagtcagaagaagagagagccagagtcccccaacaag
agcacttctccaagctcaggagaggaggagaatacagacgtagtggacagtgtgagcaac
agtgagactgccagcgatgcgaccatgccagaggttgaggatcaagtggatggtgaggtg
atccgggagattgaaaccgctctctctgcagtcattccagtgggagaagttgctcttgcc
aaagaggaagaagaacaggatgtagatgatgggagttgcttgacgaaggcaaaaagcaag
gacatagaagttgaagtgggtgaggagaagagtgagaaggaggcagagacatcagatgag
cagagccagtacagtagcccagacgagtcatctaggagcgaggaaacagaaacagatgat
aggattctgggcaagacaagtcgttggactgaggaggtgatggatacagatgaggatgac
agtgacgaggaagatgagagcatagataatgacgaccactcatgcctaacacaggtagtg
gttgggttgctggaaatgctggaaatggtgttgaagtattcttctgacaccactaccagg
acattgttggctgaggctttgttcatggatcaagtgttgatcatgtgcaaccaccctcag
cccattattaggtgttctgtcttcaagctgtttaccgtgatactagacaggtgctcccca
gaggacatggtcatgcacctgcgtcagaatgttccattagtgatggctcagcagctgcac
aaacacagcacgatttctacacagctagtcactgctgcattttcccttgctctgggacga
tcttttacctttgaggactatgccattgatagtgacccaagccttgctcttcctaatcag
gtggtgctcttcatcccactgatggctctgttgccgcactcagcccaagacatagctctg
tgccacaactcccttatggttctgttagacctccttcacaagaataccgaactgatcatc
ccactcattcacaaagctcactttgtggactcactcctttccaccatgaagaagtctctg
catgacaacaaccttggcatcaatgacatcacaggtgagagtgagtgtgaggtggtggtg
tctgacatcactgaaatcttctcctggatcatcaactgcctggtagcatcaccccaacac
aaacacttcatgctgagtctcgaggtgcttcaccagctaaacctcttatgtcgaggagaa
gcagcccagtgtggaggccaggctagttgtgtggggcacttgcgcagtacagaggcagct
cttttgcaagtcgctcttacacgcattcaagccacagcctccacacatctacattctatt
ggacaggatctaagtaacagtattagagaggagaagacctttggaatttctggatcatcc
agtctacacaacatcaagctgtttgccaccatggcagctcgagatgacagtgattcaggc
gttggatctgttttagccaattacacaactatacccttaacacacagcttgcacaacata
gctgatcagctgttcatgtctcagagccgcagttctccatccctcgttcttagtaatgca
aaaaaggaggacaaagttcttgcccattctgagatagttgacagatttaaagtgctgttg
cagaaagctacagattttgtgttcatgtctgcatggtcatctgttgagtctgtgggcaat
gagatgccatctggcggtgcaccagaaaccttcagcttgttcctacttgaactcctttta
agcgcagctgcaaccatcacacagcggaaaggcacagccgatcgcactggctgggagcgt
gtagtgtggggttgccaggatattttgagacttcacctcacacacctcctggctctggtc
acatcccctaggacacacatccacacccggctcagagctgctcaatcactggccacccac
tcacgaatacagcctgttctttcatatgcaaacaaggcaaatccacagttactctacaaa
gtaggaatctttatgcatgaactgcgataccagaatgagaacaagttagatggagcagct
gtcaagtgttgtgaaatggttctccagatactagaagattgcactgttcatgtcttgcct
ccaccagagctatacccacctcatggagccatgaaggagtggagtgtagtcattgaggag
aaaaaacagtggcaagatgaggcagcaaagattgcagccctgattgtcgatcggtgcacc
aagcaggacaaacgactactgacgaaaaacagccaagtctatgagtcggtagcaggagaa
tgcagtcgcctcacacgcacagttgtagacaggcagaatgtagaaaggaaagtagttctc
gggggcatcaagcactcacagtgtcgccatgtccacttgacacacagatggagaagcctg
attgatctcctcacacatgagagagctacttggcatttcccagaagcttatccaaggtcc
tggcagctagaccaaactgaaggcccaatgagagtccgcaaaaggctcaagagaggtcgc
cttaatatacaacctcgttacctcatgccagaatatagacagaaattagacatagaaaat
aaattagctcctctagaagctgtccttcagggatcagagactgagtcagcaatggcggtc
atgatcgaacgacttaatgtgagcgaacgcatcatccacatgagcagtgcttctgttgtc
tctccagggatggaacagcgaggtgaaatcctcatcagccggactgcaatgtattttgtg
ggagaacaagttacgattgacatgaaccagtgtggtagcagcagcgaagtggtgtctgtg
acgtggcccctcgacaacatccgcgagatccacatccgccgattccaactccaggactgc
gcattggaggtcttcctaacaaccgggcactctgtcctgctggccttcactgacacccag
cacaggaaccaggttatcgggatcttgagcacatctgaccttccaaatctttcgagcaaa
gcaactttacctgaagtcaccacacaatggagggaaggtcacataacaaactatgaatat
ctgactcaactgaacaagcttgctggtcgttctttcaatgacctgatgcagtatcctgtg
ttccccttcattctctccaactacattgttgagatcctgaaccttaatgacccagctgtg
tataggaatttgaagaagcctattgcagtacaacataaacacaaggagcaacattacatt
aataactatgagataacaaggcagatgagtcagaatgcaggagatggtccttaccactat
ggctcccactacagcaactcagggattgttctccacttcctcgtgcgcctgcctcccttc
actcagctctttcttagatatcaagatgggaactttgacatcccagaccgcactttccat
gccgttcagacctcgtggcgtttggcttcctgcgattcaaccacagatttcaaggaactt
atcccagagttctttttcctgccagaaatattccttaactctgagggtttcaactttggt
gttcggcaaagtggggaaagagtgcatcatgtccaccttcctccctggagtggagatgat
ccaagaaggtttgtgcttgtacaccgtgctgccctggagtcaccatatgtgactcagaac
cttcaccactggattgatcttgtgtttggccacaaacagactggccgtgcagctgttgaa
gcaatcaacgtctttcatcctgctacatactttgggtatgatgttgagagtggtggagac
gaaataggccgagaagcgaggaaagcaatgatcaaaacatatgggcagactcctcagcag
ttgtttagccacccacacccgcctgtcagtaatgctggatttgcacaaaacccccaggca
ccagaagtcctacatgaagtacgagggcttcgttggggttcgtatgctggttcacctgca
gacgatcgacccattctggcgttggtgcagttgctcaaaacgccagctgcctatgtcacc
agcatttcgggaacagagttgctgctgatgcctccacacacacatcttgtcacagctgga
gtagaaaaaggacttatttgggcaggcaccaccagtgcatacatcgtatcatctcatcac
aaagacggaatcatacgctgccgccgccacaaagatacactatcccagcctctcattgct
gtaccaccatttgacaaggtcatgtggtgtagcagtggaagtggccaggtatgggttggt
cttgcatcaggtcagatcctagtataccaggtgtctccatatcatgcagggggagacctg
aaagccactcttaccccgacaacactgttagcacacacagctcccatcatgcatatgtat
gtgtctgaagcattcagtgtgtgtgtttcaggtggaaaagatggcatgtgtgttctgtgg
gacacaaataggttgtcatatatcaggagtattggatccagtggtgttgaagtctctctc
ttggccatgagtgaaactttgggtgactgggcatcagtcagtcctttaggctctgctgcc
tctgttctgcgcctctacaccataaatggagcgttggttgactctgtagtcacccctgca
cctgtaacagcaatcaccttctcctcagcacctgagggcacagctgttaatgtcattgct
acaagcttagcagatggcattattagactttggagtgtgtgggaccttcgcccagttcgg
gagctgagaactgacagagccaggcaaccaatcatctcgcttcattatactcgtgacaac
caccacctatgtggcatcacagagactggcgttctgctggtgtgggaatcgtcacttgtc
aaaaccaaaatgccaaagttcatcactgttccagccatttag
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