Pseudomonas chlororaphis subsp. piscium: C4K32_1989 Help Entry C4K32_1989        CDS       T09060                                  Name (GenBank) DNA ligase (NAD(+))   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pchp  Pseudomonas chlororaphis subsp. piscium Pathway pchp03030   DNA replication pchp03410   Base excision repair pchp03420   Nucleotide excision repair pchp03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pchp00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     C4K32_1989    03410 Base excision repair     C4K32_1989    03420 Nucleotide excision repair     C4K32_1989    03430 Mismatch repair     C4K32_1989  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pchp03032]     C4K32_1989    03400 DNA repair and recombination proteins [BR:pchp03400]     C4K32_1989 Enzymes [BR:pchp01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      C4K32_1989 DNA replication proteins [BR:pchp03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      C4K32_1989 DNA repair and recombination proteins [BR:pchp03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      C4K32_1989    NER (nucleotide excision repair)     GGR (global genome repair) factors      C4K32_1989    MMR (mismatch excision repair)     DNA ligase      C4K32_1989   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       C4K32_1989 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT DUF4796_N Motif Other DBs NCBI-ProteinID:  AZC68661 LinkDB All DBs Position 2128353..2130719 Genome browser AA seq 788 aa AA seqDB search MTAVETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELVSSDSPTQ RVGSAALSAFTQVRHEIPMLSLGNAFEEADMREFDRRVTEGLDLPVGDLFGGGAAVEYSC EPKLDGLAVSLLYLDGALVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPATLEVRG EVYMSKAGFERLNAAQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGIGQVTA DIADTHIGNLEQLKHWGMPVSRELKLAKGIDECLDYYRDIGERRNGLPYEIDGVVFKVNS VASQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTV SNATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVAERRPQDARPVHIPQTCPVCGS HVERTQLIKRSKGKETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGDKTIEQ LVDEKLIGSPADLYKLKYEQIIDLEGFAEVSSNKLLKAIEDSKKPGLARFIYALGIPDVG EETAKVLARSLASLERVQQALPEVLTYLPDIGLEVAHEIHSFFEDSHNQEVIGALLDPQQ CGLQLQDQGDLGAEFAASTTLGGMLDKLNIPSVGPGAAQKLADKFVTLDGVVKADWLDMR QTLPEKQAKAVREFFDIAENAERALAIEAQLQAFGMHWQSEKKVVEGLPLAGQTWVLTGS LELMSRDVAKDKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKANELGLKVLDEEAFVAF LGQHGISA NT seq 2367 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgtcgaaacccgcattcttgagctgcgcgctgagctggatcagcacaactac cgctaccacgtcctcgacgagccgagcatccccgacgccgaatacgatcgcctgttccac gaactcaaggcgctggaagccgagcatccggagctggtcagcagcgattcgcccacccag cgcgtgggcagcgcggcgctctcggccttcacccaggtgcgccacgaaatccccatgctc agcctgggcaacgccttcgaagaagccgacatgcgcgagttcgatcgccgggtgaccgag gggctcgacctgccggtgggcgatctgttcggtggtggggcggcggtggaatacagctgc gagccgaagcttgatggcctggcggtcagcctgctgtatctggacggtgcgctggtgcgc ggcgcgacccgcggcgatggcaccaccggcgaagacatcagcgtcaacgtgcgtaccgtg cgcaacattccgctgaagctgcatggcagcggctggccggcgaccctcgaggtgcgcggc gaggtctacatgtccaaggccggtttcgagcgactgaatgccgcgcagctggaggttggc ggcaagaccttcgccaacccgcgtaacgccgcggcgggcagcttgcgccagctggactcg aagatcaccgccagccgtccgctggaattctgctgctacgggattggccaggtcaccgct gacattgccgacacccatatcggcaacctggagcagctcaagcactggggcatgcccgtc agtcgcgagctgaagttggccaagggcatcgacgaatgcctggattactaccgcgatatc ggcgagcgccgtaatggcttgccctatgaaatcgacggtgtggtgttcaaggtcaacagc gttgcctcgcagcgtgagctgggcttccgggcccgggagccgcgttgggcgatcgcccac aagttcccggcgatggaagagctgaccgagctgctggacgtggaattccaggtcggtcgt accggcgcggtgaccccggtggcgcgcttgaaaccggtcaaggtggcgggtgtcaccgtc tccaacgccaccctgcacaacatggacgaagtggcgcgcctgggcctgatgatcggcgac accgtgatcatccgccgcgccggcgacgtgattccgcaagtggtgcaagtggtcgccgag cgccggccacaggatgcgcgcccggtgcatatcccgcagacttgcccggtatgcggttcc catgtcgagcgcacgcaactgatcaagcgcagcaagggcaaggaaaccatcagcgaaggc gcggtgtaccgctgcgtcggtcgcctggcctgtggtgcgcagctcaagcaggcgattatc cacttcgtttcccgtcgggcgatggatatcgaagggttgggcgacaagaccatcgaacag ttggtggacgaaaaactcatcggctcgccggccgatctctacaagctcaagtatgagcag atcatcgatctggaaggcttcgccgaggtctccagcaacaagctgctcaaggccatcgaa gacagcaaaaagccgggcctggcgcgcttcatctacgccctgggcattcccgatgtgggc gaggagacggctaaggtcctggcgcgctccctggcctctctggagcgcgtacagcaagcc ttgccggaagttctgacctacctgccggatatcggcctggaagtggctcacgagattcac agcttcttcgaggacagccacaaccaagaggtgatcggtgccttgctcgatccgcagcag tgcgggttgcagttgcaggaccagggcgacctgggtgccgagtttgccgccagcaccacc ctgggcggcatgctcgacaagctgaatattccatcggtggggccgggcgcggcgcagaag ttggcggacaagttcgtcaccctcgatggtgtggtcaaggcggactggctggacatgcgc cagaccctgccggagaagcaggccaaggcggtgcgcgagttcttcgatatcgcggaaaac gccgagcgggcgctggccatcgaagcacagttgcaagccttcggcatgcactggcagagc gagaagaaggtggtggaaggattgccgctggctggccagacctgggtgctcactggctcc ctggagctgatgagtcgcgacgtggccaaggacaagctggaaagcctgggcgccaaggtt gccggctccgtttcggccaagacccactgcgtggtggccggccctggcgccggctcgaag ctggccaaggccaacgaactgggcctcaaggtgctggatgaggaggccttcgtggccttc ctcggccagcacggcatctcggcataa

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