Pseudomonas chlororaphis subsp. piscium: C4K32_3702
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Entry
C4K32_3702 CDS
T09060
Name
(GenBank) RND efflux system, inner membrane transporter
KO
K18299
multidrug efflux pump
Organism
pchp
Pseudomonas chlororaphis subsp. piscium
Module
pchp_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
pchp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchp02000
]
C4K32_3702
01504 Antimicrobial resistance genes [BR:
pchp01504
]
C4K32_3702
Transporters [BR:
pchp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4K32_3702
Antimicrobial resistance genes [BR:
pchp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
C4K32_3702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF5693
Motif
Other DBs
NCBI-ProteinID:
AZC70362
LinkDB
All DBs
Position
4073510..4076692
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AA seq
1060 aa
AA seq
DB search
MNFSQFFVRRPIFSIVLSLLILIGGIVSLFQLPVSEYPEVVPPTIVVRAQFPGANPDVLG
KTLASPLEQAITGVENMLYMSSQSTSDGSMTLTLTFALGTDLNAAMVQVQSRVTRATTQL
PPDVQRLGVTVDKTSPALAQVVHLYSPSGQYDPTYLANYMTIHVIDELYKIEGVSDIRLL
GMGDYALRVWLDPDKVASYNLAATDVIRAIREQNREVAVGSLGTPPNASDNAFQLLINAR
GRLVDEDEFERIIVHAGERGEIVRLRDVARIELGSSQYALRAHLDGRPSAALQIFQDADA
NSIELSDRLRKRMSELAQDFPPGVEHSIGYDPTIFVRSSITAVVYTLLEAVALVVLVVIL
FLQTWRASIIPLAAVPVSLIGTLAVMQLLGFSINALSLFGLVLAIGIVVDDAIVVVENVE
RNIGLGKSPVEATRQAMKEVTGPVIATALVLCAVFIPSAFITGLTGQFYRQFALTIAIST
VISAFNSLTLSPALAAILLKGKDVPKDRLSKLIDRLFGGWLFRPFNRLFQRASAGYVNLA
TRLLRAGSIVLMLYVGLLGLAYLGLEKTPTGFIPQQDKQYLVAFAQLPEGASLDRTEAVI
LKMSELALKHPGVANTVSFSGLSINGFVNSASAGLMFIPLESFAERKDASMSDTAIAQAL
AAEYGRIQEAFVMVVPPPPVESLGSIGGFRVQIEDRGSLGHEALYQQIQSLVDKARALPE
LAGVFSSYQVNVPQIDADIDRDKAKAHGVAIDEIFDTLQVYLGSMYANDFNRFGRTYHVN
VQAEQAYRMAPEQIGRLKVRNRQGDLIPLSSFVRIRESAGPDRVMHYNGFLSAEINGSPA
PGYSSGQAQAAMERLLQQELPNGMAYEWTELTYQQILAGNTALLVFPLCVLLAFLVLAAQ
YESWSLPLAVVLIVPMTLLSAIAGVLLTGGDNNIFTQISLIVLAGLACKNAILLVEFARE
KQQQGLDCVSAVLKACHLRLRPILMTSIAFIMGVVPLVLSSGAGAEMRRAMGIAVFSGMV
GVTFFGLLLTPVFYVWLRRLVERRSQRRAAMKKVLWEGKA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcgcagttttttgtgcgacgcccgatcttctccatcgtcctgtcgctgctc
atcctgatcggcgggatcgtctccctgttccaattgccggtcagcgagtatccggaagtc
gtgccgcccaccattgtggtgcgggcacaatttccgggcgcgaaccccgacgtgctcggc
aagaccctggcctcaccactggagcaggccatcaccggcgtggagaacatgctctacatg
tcctcccagtcgacctcggacggctcgatgaccctgaccctgaccttcgcgctggggacg
gacctcaacgccgcaatggtccaggtacagagccgggtcacccgcgcgaccacccagctg
cctccggatgtccagcggttgggcgtgaccgtggacaagacatcgccggcgctggcccag
gtcgttcacctgtattcgccgagcggccagtacgacccgacctatcttgccaactacatg
accattcacgtcatcgacgagctgtacaagatcgagggggtcagtgatatccgcctgctg
gggatgggcgactatgccctgcgggtctggctggatccggacaaggtggcttcctacaac
ctggccgcgacggatgtgatacgcgccatccgcgagcagaaccgggaggtcgccgtaggc
tctctcggtacaccgccaaacgcgagcgacaacgccttccagttgctcatcaacgcccga
ggccggctggtcgacgaggacgagttcgagcgcatcatcgtgcatgccggcgagcgcggc
gaaatcgtccgcctgcgcgacgtcgcacgcatcgaactgggctcgagccagtatgcgctg
cgcgcgcatcttgacggtcgcccttccgctgccttgcagattttccaggacgcggatgcc
aattccatcgaactgtccgaccggcttcgcaagcggatgagtgagcttgctcaagacttc
ccaccgggcgtcgaacactcgatcggctacgaccccaccatcttcgtgcgcagctccatc
accgcggtggtgtataccttgctggaggccgtcgcgctcgtggtgctggtggtcatcctc
tttctgcagacctggcgcgcgtcgatcattccactggccgcagtgcctgtgtccctgata
ggcacgctcgcggtcatgcaactgctgggcttttccatcaacgcgctatcgctgttcggc
ctggtgctggctatcgggatcgtggtcgacgacgccatcgtcgtggtggagaacgtcgag
cgcaacatcggcctgggcaagtcacccgtagaggcaacccgccaggccatgaaggaagtc
acaggtccggtcatcgccaccgccctggtgctgtgcgcggtgttcattccgagcgctttc
atcaccggcctcaccgggcagttctaccggcagttcgcgctcaccatcgcgatatcgacg
gtgatctcggcgttcaactcgttgaccttgtcgccggccctggcggcgatactgctcaaa
ggcaaggacgtacccaaggatcgcctgtcgaagctgatcgaccgcctgttcgggggttgg
ctgttccgtccgttcaatcgactgttccagcgggcaagcgcgggttacgtcaacctcgcc
acgcgactgctgcgagccggctccatcgtcctgatgctgtatgtcggcctgctggggctg
gcctatctgggattggagaaaacccccaccggcttcatccctcagcaggacaagcagtac
ctggtcgcctttgcccagttacccgaaggcgccagcctggaccgtaccgaggccgtcatc
ctgaagatgtccgagcttgccctgaagcacccgggggtggccaataccgtgagtttcagc
ggcctgtccatcaacggtttcgtcaacagcgcgagcgcggggctcatgttcatcccgctt
gagtccttcgctgaacgcaaggacgcctcgatgtccgacaccgccatcgcccaggccttg
gccgccgagtatgggcggatccaggaggccttcgtgatggtggttcccccaccgcccgtg
gaaagcctgggctctatcggaggcttccgggtgcagatcgaggaccgcggcagcctgggg
catgaagcgctctaccagcagattcagtcactggtggacaaagcccgggcgctgcccgaa
ctggccggtgtgttctccagctaccaggtgaatgtcccgcagatcgacgcggatatcgat
cgggacaaggccaaggcccatggggtggcgatcgacgaaatcttcgacaccctgcaggtc
tacctgggctcgatgtacgccaatgacttcaaccgcttcgggcggacctaccacgtcaat
gtccaggctgagcaggcctaccgcatggcgccggagcagatcggcaggctgaaagtacgc
aaccgacagggcgacctcatcccgctgtcatccttcgtccggatacgggaatcggccggt
cctgaccgtgtgatgcattacaacggtttcctctccgccgagatcaacggcagcccggct
ccagggtacagctccggccaggcccaggcggccatggagcggctgttgcagcaggaactg
cccaacggcatggcttatgagtggaccgaactgacctaccagcagattctcgccggcaat
accgccctgctggttttccccttgtgcgtgctgctggcgttcctggtgctggccgcgcag
tacgagagctggagcctgccactggcggtggtgctgatcgtccctatgaccctgctgtcg
gccattgccggggtgctgctcaccggcggcgacaacaacatcttcacccagatcagcctg
atcgtgctggcggggctcgcgtgcaagaacgccatcctgctggtggagtttgcccgggag
aaacagcagcagggcctggactgcgtcagcgcagtgctgaaggcctgccatctgcgctta
cgcccgattctgatgacgtccatcgccttcatcatgggcgtggtgcctttggtgttgtcc
tccggcgccggcgccgagatgcggcgggccatgggcatcgcggtgttctcagggatggtc
ggtgtcaccttcttcggcctgctcctgacgccggtgttctatgtgtggctgcgtcgcctg
gtggaaagacgcagccaacggcgcgccgccatgaagaaggtgctttgggagggcaaggca
tga
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