Pseudomonas cichorii: PCH70_13260
Help
Entry
PCH70_13260 CDS
T03002
Name
(GenBank) radical SAM domain-containing protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
pci
Pseudomonas cichorii
Pathway
pci00790
Folate biosynthesis
pci01100
Metabolic pathways
Module
pci_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
pci00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
PCH70_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pci03016
]
PCH70_13260
Enzymes [BR:
pci01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
PCH70_13260
Transfer RNA biogenesis [BR:
pci03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
PCH70_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AHF66479
LinkDB
All DBs
Position
1473122..1473769
Genome browser
AA seq
215 aa
AA seq
DB search
MQDTLRITEIFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGKILSLEDILEQ
VAAYRPRYVCVTGGEPLAQPNAIPLLERLCDAGYEVSLETSGALDISAVDSRVSRVVDLK
TPGSKEVARNRYENMELLTPNDQVKFVICSRDDYDWAVSKLIQYGLDKRAGEVLFSASHH
ELKGRDLADWIVADNLPVRLQMQLHKILWDDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacattacgtatcaccgaaatcttttactcgttgcagggtgaaactcgtacg
gctgggctacccaccgtattcgtgcgcctcacgggttgtccgctgcgctgccagtattgc
gacagtgcctatgcattcagcggcggaaagatcctgtcgctggaagacatccttgagcag
gtcgctgcctatcgtccgcgttatgtctgtgtaaccggtggtgaaccgcttgcccagccc
aatgccattcccttgctcgagcgcctgtgtgatgccggttacgaggtttcgctggaaacc
agtggtgccctggatatctcggctgtagacagtcgtgtcagtcgcgtcgtcgacctgaag
accccaggctccaaggaagttgctcgcaatcgctacgaaaacatggaattgctgacgccc
aacgatcaggtcaagtttgtgatctgttccagggacgactatgactgggctgtgtccaag
ctgattcagtacgggctggacaagcgcgctggtgaagtgctgttttctgccagccaccat
gagctgaaaggccgtgatctggccgactggatcgtggcagacaacctgccggtccgcttg
cagatgcagttgcataaaattctttgggacgacgagccggggcgctga
DBGET
integrated database retrieval system
